Results 201 to 210 of about 108,124 (355)

Publisher Correction: Size-fractionated microbiome observed during an eight-month long sampling in Jiaozhou Bay and the Yellow Sea

Scientific Data, 2022
Jianchang Tao, Wenxiu Wang, JL Weissman, Yongyu Zhang, Songze Chen, Yuanqing Zhu, Chuanlun Zhang, Shengwei Hou   +7 more
doaj   +1 more source

Domain-specific osmoadaptation revealed by metatranscriptomic analysis in hypersaline environments. [PDF]

Sci Rep
Mirete S, Lamprecht-Grandío M, de Figueras CG, González-Pastor JE.   +3 more
europepmc   +1 more source

The Impact of Whole‐Animal Fluid Preservation on the Observed Gut Microbiome of Vertebrates: Implications for the Use of Museum Specimens in Microbiome Research

Molecular Ecology Resources, EarlyView.
ABSTRACT The vertebrate gut houses diverse microbial communities that provide insights into their host's ecological and evolutionary histories. Nevertheless, microbiome research has not been distributed equally across host taxonomy, geography and timescales. The millions of fluid‐preserved specimens stored in natural history museums worldwide represent
Samantha S. Fontaine, Stevie R. Kennedy‐Gold, Kurt J. Regester, Jennifer A. Sheridan, Kevin D. Kohl   +4 more
wiley   +1 more source

The emergence of metabolisms through Earth history and implications for biospheric evolution. [PDF]

Philos Trans R Soc Lond B Biol Sci
Moody ERR, Williams TA, Álvarez-Carretero S, Szöllősi GJ, Pisani D, Lenton TM, Donoghue PCJ.   +6 more
europepmc   +1 more source

A Practical Comparison of Short‐ and Long‐Read Metabarcoding Sequencing: Challenges and Solutions for Plastid Read Removal and Microbial Community Exploration of Seaweed Samples

Molecular Ecology Resources, EarlyView.
ABSTRACT Short‐read metabarcoding analysis is the gold standard for accessing partial 16S and ITS genes with high read quality. With the advent of long‐read sequencing, the amplification of full‐length target genes is possible, but with low read accuracy.
Coralie Rousseau, Nicolas Henry, Sylvie Rousvoal, Gwenn Tanguy, Erwan Legeay, Catherine Leblanc, Simon M. Dittami   +6 more
wiley   +1 more source

Impact of Habitat Transformation on Soil Microbial Diversity and Functionality in Karst Mountainous Parks: A Comparative Study of Remnant Forests and Artificial Green Spaces. [PDF]

Ecol Evol
Cen C, Wang W, Jian M, Wang Z, Yang J.
europepmc   +1 more source

Methyl‐coenzyme M formation in methanogenic archaea [PDF]

, 2000
Karin Sauer, Rudolf K. Thauer
openalex   +1 more source

Quantifying Soil Microbiome Abundance by Metatranscriptomics and Complementary Molecular Techniques—Cross‐Validation and Perspectives

Molecular Ecology Resources, EarlyView.
ABSTRACT Linking meta‐omics and biogeochemistry approaches in soils has remained challenging. This study evaluates the use of an internal RNA extraction standard and its potential for making quantitative estimates of a given microbial community size (biomass) in soil metatranscriptomics. We evaluate commonly used laboratory protocols for RNA processing,
Mathilde Borg Dahl, Stella Brachmann, Andrea Söllinger, Marina Schnell, Laureen Ahlers, Magdalena Wutkowska, Katharina J. Hoff, Neetika Nath, Verena Groß, Haitao Wang, Micha Weil, Marc Piecha, Marc Schaffer, Corinna Jensen, Andreas W. Kuss, Christoph Gall, Erika Wimmer, Thomas Pribasnig, Alexander Tøsdal Tveit, Bjarni D. Sigurdsson, Christa Schleper, Andreas Richter, Tim Urich   +22 more
wiley   +1 more source

Proteasomes in the archaea: from structure to function [PDF]

, 2000
Julie A. Maupin‐Furlow
openalex   +1 more source

Taxon‐specific BLAST percent identity thresholds for identification of unknown sequences using metabarcoding

Methods in Ecology and Evolution, EarlyView.
Abstract The identification of organisms in environmental samples using metabarcoding relies on factors such as taxonomic assignment methods, genetic markers, reference databases and confidence thresholds for taxonomic assignment. Because lineages evolve at different rates, a global threshold (e.g.
Paula Pappalardo, Jan M. Hemmi, Ryuji J. Machida, Matthieu Leray, Allen G. Collins, Karen J. Osborn   +5 more
wiley   +1 more source