Results 111 to 120 of about 131,326 (303)

Coordinates and intervals in graph-based reference genomes

open access: yesBMC Bioinformatics, 2017
Background It has been proposed that future reference genomes should be graph structures in order to better represent the sequence diversity present in a species.
Knut D. Rand   +5 more
doaj   +1 more source

Soft Mechanical‐Electrical Logic Using Liquid Metal‐Filled 3D‐Printed Architectures

open access: yesAdvanced Engineering Materials, EarlyView.
We present 3D‐printed soft mechanical–electrical logic elements that use liquid metal–filled silicone tubes actuated by thermoplastic polyurethane/polylactic acid (TPU/PLA) architectures to produce Boolean operations. Complementary normally open and normally closed unit cells perform repeatable binary transitions and can be combined into more complex ...
Christoph Lehmann   +2 more
wiley   +1 more source

Maximal pivots on graphs with an application to gene assembly

open access: yesDiscrete Applied Mathematics, 2010
modest revision (including different latex style) w.r.t.
Robert Brijder, Hendrik Jan Hoogeboom
openaire   +3 more sources

Complexity of graph self-assembly in accretive systems and self-destructible systems [PDF]

open access: yes, 2005
. Self-assembly is a process in which small objects autonomously associate with each other to form larger complexes. It is ubiquitous in biological constructions at the cellular and molecular scale and has also been identified by nanoscientists as a ...
Sudheer Sahu, John H. Reif, Peng Yin
core   +1 more source

Parallel short sequence assembly of transcriptomes

open access: yesBMC Bioinformatics, 2009
Background The de novo assembly of genomes and transcriptomes from short sequences is a challenging problem. Because of the high coverage needed to assemble short sequences as well as the overhead of modeling the assembly problem as a graph problem, the ...
Aluru Srinivas   +2 more
doaj   +1 more source

Experimental and Numerical Modal Analysis of Composite Sandwich Structures Using Surfboards as Model Systems

open access: yesAdvanced Engineering Materials, EarlyView.
This article presents an experimental and numerical modal investigation of composite sandwich structures using surfboards as model systems. By comparing different core materials and reinforcement strategies, the study demonstrates how local stiffeners influence vibrational response and introduce characteristic modal features, highlighting modal ...
Brett Connellan   +4 more
wiley   +1 more source

Streaming Methods for Assembly Graph Analysis [PDF]

open access: yes, 2022
The advent of high-throughput sequencing has radically altered the theory and practice of biology. Massive volumes of sequence data have necessitated commensurate advances in computational approaches to biological analysis; methods for the assembly of ...
Welcher, Camille Scott
core  

Oatk: a de novo assembly tool for complex plant organelle genomes

open access: yesGenome Biology
Plant organelle genomes, particularly large mitochondrial genomes with complex repeats, present significant challenges for assembly. The advent of long-read sequencing enables the assembly of complete genomes, but problems of resolving alternative ...
Chenxi Zhou   +5 more
doaj   +1 more source

New AI‐Assisted Approach for Expanding the Solution Space: Application to Lattice Structure Design

open access: yesAdvanced Engineering Materials, EarlyView.
This work introduces an innovative framework for designing structured materials by ex panding the design space through reparameterization of qualitative variables into continuous structural descriptors. Combined with machine‐learning‐based prediction and multi‐objective optimization, the approach enables the discovery of novel lattice architectures ...
G. H. Gahimbare   +5 more
wiley   +1 more source

Directed self-assembly using graph grammars [PDF]

open access: yes, 2004
. In this paper we describe the graph grammar approach to modeling self-assembly. The approach is used to describe how the topology of an assembling aggregate changes as it grows.
Eric Klavins
core  

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