Results 81 to 90 of about 262,026 (340)
Automatic protein clustering as a basis of automatic annotation [PDF]
Nature Precedings, 2010 AbstractDevelopment of new generation sequencers enabled genome sequencing feasible for every organism in a laboratory. A typical data flow of de novo seuqencing includes (1) assembly of sequence reads, (2) estimation of open reading frames, (3) annotation of proteins, and (4) finding RNA genes.
openaire +1 more source
Molecular Oncology, EarlyView.In molecular cancer diagnostics, comprehensive genomic profiling (CGP) is going to replace the small NGS panels since it provides all clinically relevant somatic variants as well as genomic biomarkers with clinical value. Here, we compared two CGP assays and demonstrate that the choice for diagnostic implementation will depend on the specific ...
Guy Froyen +17 more
wiley +1 more source
A text-based approach to the ImageCLEF 2010 photo annotation task [PDF]
, 2010 The challenges of searching the increasingly large collections of digital images which are appearing in many places mean that automated annotation of images is becoming an important task. We describe our participation in the ImageCLEF 2010 Visual Concept
Jones, Gareth J.F. +2 more
core +2 more sources
Molecular Oncology, EarlyView.Epithelial–mesenchymal transition (EMT) and tumor‐infiltrating lymphocytes (TILs) are associated with early breast cancer response to neoadjuvant chemotherapy (NAC). This study evaluated EMT and TIL shifts, with immunofluorescence and RNA sequencing, at diagnosis and in residual tumors as potential biomarkers associated with treatment response.
Françoise Derouane +16 more
wiley +1 more source
The GATO gene annotation tool for research laboratories
Brazilian Journal of Medical and Biological Research, 2005 Large-scale genome projects have generated a rapidly increasing number of DNA sequences. Therefore, development of computational methods to rapidly analyze these sequences is essential for progress in genomic research.
A. Fujita +4 more
doaj +1 more source
Fuzzy Neighbor Voting for Automatic Image Annotation [PDF]
Journal of Electrical and Computer Engineering Innovations, 2016 With quick development of digital images and the availability of imaging tools, massive amounts of images are created. Therefore, efficient management and suitable retrieval, especially by computers, is one of themost challenging fields in image ...
V. Maihami, F. Yaghmaee
doaj +1 more source
Modern tools for annotation of small genomes of non-model eukaryotes [PDF]
arXiv, 2021 Nowadays, due to the increasing amount of experimental data obtained by sequencing, the most interest is focused on determining the functions and characteristics of its individual parts of the genome instead of determining the nucleotide sequence of the genome.
arxiv
, 2016 The widening gap between known proteins and their functions has encouraged the development of methods to automatically infer annotations. Automatic functional annotation of proteins is expected to meet the conflicting requirements of maximizing ...
Boudellioua, Imane +4 more
core +2 more sources
A framework for evaluating automatic image annotation algorithms [PDF]
, 2010 Several Automatic Image Annotation (AIA) algorithms have been introduced recently, which have been found to outperform previous models. However, each one of them has been evaluated using either different descriptors, collections or parts of collections ...
A.W.M. Smeulders +12 more
core +2 more sources
Transcriptome‐wide analysis of circRNA and RBP profiles and their molecular relevance for GBM
Molecular Oncology, EarlyView.CircRNAs are differentially expressed in glioblastoma primary tumors and might serve as therapeutic targets and diagnostic markers. The investigation of circRNA and RNA‐binding proteins (RBPs) interactions shows that distinct RBPs play a role in circRNA biogenesis and function.
Julia Latowska‐Łysiak +14 more
wiley +1 more source