Results 11 to 20 of about 161,738 (292)
Taxonomy of bacterial fish pathogens [PDF]
Veterinary Research, 2011 Bacterial taxonomy has progressed from reliance on highly artificial culture-dependent techniques involving the study of phenotype (including morphological, biochemical and physiological data) to the modern applications of molecular biology, most ...
Austin Brian
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Genomics in Bacterial Taxonomy: Impact on the Genus Pseudomonas. [PDF]
Genes (Basel), 2020 The introduction of genomics is profoundly changing current bacterial taxonomy. Phylogenomics provides accurate methods for delineating species and allows us to infer the phylogeny of higher taxonomic ranks as well as those at the subspecies level. We present as a model the currently accepted taxonomy of the genus Pseudomonas and how it can be modified
Lalucat J +3 more
europepmc +5 more sources
Functional Taxonomy of Bacterial Hyperstructures [PDF]
Microbiology and Molecular Biology Reviews, 2007 SUMMARYThe levels of organization that exist in bacteria extend from macromolecules to populations. Evidence that there is also a level of organization intermediate between the macromolecule and the bacterial cell is accumulating. This is the level of hyperstructures. Here, we review a variety of spatially extended structures, complexes, and assemblies
Norris, V. +12 more
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Biology, 2021 Pseudomonas is a large and diverse genus broadly distributed in nature. Its species play relevant roles in the biology of earth and living beings. Because of its ubiquity, the number of new species is continuously increasing although its taxonomic ...
Zaki Saati-Santamaría +4 more
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Functional and Taxonomic Effects of Organic Amendments on the Restoration of Semiarid Quarry Soils
mSystems, 2021 The application of organic amendments to mining soils has been shown to be a successful method of restoration, improving key physicochemical soil properties.
Isabel Miralles +2 more
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Bacterial nomenclature in the era of genomics
New Microbes and New Infections, 2021 The remarkable success of taxonomic discovery, powered by culturomics, genomics and metagenomics, creates a pressing need for new bacterial names while holding a mirror up to the slow pace of change in bacterial nomenclature. Here, I take a fresh look at
M.J. Pallen
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Microorganisms, 2020 The genus Cyclobacterium belongs to the phylum Bacteroidetes and includes eight species. Our study, based on the genomic parameters in silico DNA–DNA hybridization (GGDC), average nucleotide identity (OrthoANI), and average amino acid identity (AAI ...
Azadeh Shahinpei +5 more
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New Microbes and New Infections, 2016 During a 12-year period we isolated five Corynebacterium argentoratense strains identified by phenotypic methods, including the use of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF) and 16S rRNA gene sequencing ...
I. Fernández-Natal +9 more
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How to Name and Classify Your Phage: An Informal Guide
Viruses, 2017 With this informal guide, we try to assist both new and experienced phage researchers through two important stages that follow phage discovery; that is, naming and classification.
Evelien Adriaenssens, J. Rodney Brister
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Plants, 2021 Pectobacterium parmentieri is a plant-pathogenic bacterium, recently attributed as a separate species, which infects potatoes, causing soft rot in tubers. The distribution of P.
Anna A. Lukianova +6 more
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