Correction to 'GTDB release 10: a complete and systematic taxonomy for 715 230 bacterial and 17 245 archaeal genomes'. [PDF]
europepmc +1 more source
Targeted isolation of bacteria with potential to competitively exclude Staphylococcus aureus in the upper respiratory tract of pigs. [PDF]
Vlasblom AA +10 more
europepmc +1 more source
Complete genome sequence of the phage UNICOR_HM-QL, a <i>Berlinviru</i>s infecting <i>Escherichia coli</i> and <i>Salmonella</i> with potential for biocontrol in milk for Costeño cheese production. [PDF]
Mendoza-Corvis F +5 more
europepmc +1 more source
Antibiotic Remodeling of the Gut Microbiota Impairs Host Resistance to Secondary Infection
Gut microbial dynamics induced by four antibiotics, revealed distinct taxonomic and functional shifts. Vancomycin‐perturbed bacteriomes were proven to promote pathogen resistance to antibiotic treatment. Metronidazole‐treated mice showed pronounced Salmonella translocation to hepatic tissue, and altered Enterococcus avium populations modulated host ...
Miaoyu Li +17 more
wiley +1 more source
Integrating natural gradients and controlled assays to reveal bacterial responses to cadmium in Theobroma cacao L., soils. [PDF]
Jaramillo-Mazo C +3 more
europepmc +1 more source
bacNeo: A Computational Toolkit for Identifying Bacteria‐Derived Neoantigens in Human Cancers
We present bacterial neoantigen (bacNeo), a multi‐omics‐based computational software to classify bacterial components (BACC), type bacteria‐bound HLA alleles (BACH), and prioritize bacterial peptides as neoantigens (BACP). Bacterial neoantigen potential is quantified by score for peptide antigenicity recognition & kinetics (SPARK), enabling ...
Yunzhe Wang +5 more
wiley +1 more source
Dominant contribution of Asgard archaea to eukaryogenesis. [PDF]
Tobiasson V, Luo J, Wolf YI, Koonin EV.
europepmc +1 more source
Prebiotic Ginseng polysaccharides (GP) alleviate mastitis through selective enrichment of gut L. murinus, which elevates its anti‐inflammatory metabolite deoxycholic acid (DCA). Circulating DCA engages mammary epithelial TGR5 receptors, triggering the cAMP–PKA pathway to suppress NF‐κB/NLRP3‐mediated inflammation.
Zhijie Zheng +15 more
wiley +1 more source
Complete genome sequence of <i>Sedimentibacter</i> sp. strain MB31-C6, isolated from sewage sludge. [PDF]
Zhang H +6 more
europepmc +1 more source
Comprehensive understanding of how diverse PGPR strains enhance the rhizosphere microenvironment remains a considerable challenge. Here, we provide experimental evidence that a functionally synergistic composite microbial formulation can markedly enhance growth performance and improve the quality attributes in Angelica sinensis.
Zongyu Zhang +13 more
wiley +1 more source

