Results 131 to 140 of about 1,215 (163)

Spatial multiomics to inform immunocytokine engineering: knowledge base, gaps, and QC solutions. [PDF]

Front Immunol
Patel P, Batty LD, Bleck M, Nathan S.
europepmc   +1 more source

Spatially resolved T cell receptor diversity mapping uncovers variability of the cancer immune microenvironment. [PDF]

EBioMedicine
Magoulopoulou A, Chatzinikolaou M, Metousis A, Hu T, Yu H, Zerdes I, Wang K, Foukakis T, Long M, Leandersson K, Micke P, Strell C, Nilsson M.   +12 more
europepmc   +1 more source

ST-SCSR: identifying spatial domains in spatial transcriptomics data via structure correlation and self-representation. [PDF]

Brief Bioinform
Zhang M, Zhang W, Ma X.
europepmc   +1 more source

Spatial2GWAS: a database for linking spatial transcriptomic regions with GWAS traits. [PDF]

Nucleic Acids Res
Hu X, Wang A, Yu H, Kim P, Zhou X.
europepmc   +1 more source

Progenitor T cells drive chronic pulmonary type 2 inflammation. [PDF]

Nat Immunol
Kratchmarov R, Jia X, Nagai J, Pacheco GA, Perniss A, Bell MR, Gül E, Thompson TW, Hayashi H, Saghaei S, Wong C, Hastings MM, Alhallak K, Lai J, Feng C, Bankova L, Wesemann DR, von Moltke J, Boyce JA, Brennan PJ.   +19 more
europepmc   +1 more source

Inferring spatial single-cell-level interactions through interpreting cell state and niche correlations learned by self-supervised graph transformer. [PDF]

Nat Mach Intell
Xiao X, Zhang L, Zhao H, Wang Z.
europepmc   +1 more source

Spatial transcriptomic map of the mouse urinary bladder. [PDF]

Sci Rep
Matković N, Gelemanović A, Popović K, Vilović K, Oneto C, Lazarević D, Terzić IM, Novak I, Korac-Prlic J, Roje BM, Terzić J.   +10 more
europepmc   +1 more source

hoodscanR: profiling single-cell neighborhoods in spatial transcriptomics data. [PDF]

Bioinformatics
Liu N, Martin J, Bhuva DD, Chen J, Li M, Lee SC, Kharbanda M, Cheng J, Mohamed A, Kulasinghe A, Chen Y, Tan CW, Li F, Polo JM, Davis MJ.   +14 more
europepmc   +1 more source

CellNiche represents cellular microenvironments in atlas-scale spatial omics data with contrastive learning. [PDF]

Nat Commun
Liang Z, Zhong B, Jiao M, Wang Y, Liu S.
europepmc   +1 more source

Spartan: activation-aware framework for spatial domain and variable gene discovery

Faiz MFI, Jokl E, Jennings R, Piper Hanley K, Sharrocks A, Iqbal M, Baker SM.   +6 more
europepmc   +1 more source