Results 101 to 110 of about 73,009 (304)

Distribution of barcodes matching and mismatching.

, 2015
To assign an Illumina read to a particular sample, one examines both of the barcodes at each end of the sequence. In green, the two barcodes agree on which sample the read is coming from. In black, no barcodes are found on either end. In yellow, only one
Stefan Bertilsson (222722), Omneya Ahmed Osman (688758), Alexander Eiler (159198), Lucas Sinclair (514744)   +3 more
core   +1 more source

Intermittent Fasting Restores Cardiac Lipid Homeostasis in Diabetic Cardiomyopathy in Association With Akkermansia Muciniphila and 1‐methyl‐L‐histidine

Advanced Science, EarlyView.
Intermittent fasting reshapes the gut microbiota in diabetic cardiomyopathy, restoring Akkermansia muciniphila and the microbiota‐associated metabolite 1‐methyl‐L‐histidine. This shift is linked to improved cardiac lipid homeostasis, reduced lipid peroxidation, and attenuated myocardial injury, highlighting a gut microbiota–metabolite–lipid axis in ...
Kaiyuan Jiang, Fen Xiong, Yiwen Peng, Lingfei Meng, Xinran Wang, Yingruo Xu, Tian Tang, Hongchang Gao   +7 more
wiley   +1 more source

Data Release: DNA barcodes of plant species collected for the Global Genome Initiative for Gardens Program, National Museum of Natural History, Smithsonian Institution

PhytoKeys, 2017
The Global Genome Initiative has sequenced and released 1961 DNA barcodes for genetic samples obtained as part of the Global Genome Initiative for Gardens Program.
Jose D. Zúñiga, Morgan R. Gostel, Daniel G. Mulcahy, Katharine Barker, Asia Hill, Maryam Sedaghatpour, Samantha Q. Vo, Vicki A. Funk, Jonathan A. Coddington   +8 more
doaj   +3 more sources

Barcodes and adapters

, 2018
Barcodes and ...
Walker, Donald M., Matthew A. Kulp (7852463), Brian M. Leckie (2605921), Malone, Eric W., Joshuah S. Perkin (1922425), Hurt, Carla R., Leckie, Brian M., Donald M. Walker (3249153), Perkin, Joshuah S., Kulp, Matthew A., Eric W. Malone (7852460), Carla R. Hurt (7852466)   +11 more
core   +1 more source

Deconstruction of Human Age‐Related Cataract Capsules Defines Aging

Advanced Science, EarlyView.
We generate a comprehensive atlas of age‐related cataracts (ARC) at a single‐cell resolution, encompassing three disease states—mild cataract group (Mild), severe cortical cataract group (Severe_C), and severe nuclear cataract group (Severe_N). We find that ARC involves seven distinct lens capsule cell types, with notable differences in cellular ...
Qiaomei Tang, Ziyang Tong, Chunmei Fan, Silong Chen, Jiarui Guo, Jianghua Hu, Ke Yao, Zi Yin, Xiao Chen, Yibo Yu   +9 more
wiley   +1 more source

Single‐cell Transcriptome Profiling Reveals Gene Regulatory Networks and Key Genes in the Root Epidermis and Cortical Cells Associated with Early Nodulation in Glycine Max

Advanced Science, EarlyView.
Single‐cell transcriptomics of soybean roots soon after rhizobial inoculation reveals epidermal and cortical cell‐specific programs and gene‐regulatory networks acting in symbiosis establishment. We identify an ethylene‐driven regulatory circuit involving WRKY6.3/6.4 transcription factors targeting select Nod19 genes that promotes infection‐thread ...
Yongbin Zhuang, Yu Geng, Xinyu Guo, Chen Wang, Yongjing Sun, Luqi Liu, Li Liu, QianQian Gao, XinFang Zhu, Hongxiang Cao, Gengshuo Zhang, Yunxia Liu, Guobin Zhang, Baoyin Chen, Jinfei Zhang, Xin Hou, Xiaoming Li, Dajian Zhang   +17 more
wiley   +1 more source

Intact protein barcoding enables one-shot identification of CRISPRi strains and their metabolic state

Cell Reports: Methods
Summary: Detecting strain-specific barcodes with mass spectrometry can facilitate the screening of genetically engineered bacterial libraries. Here, we introduce intact protein barcoding, a method to measure protein-based library barcodes and metabolites
Vanessa Pahl, Paul Lubrano, Felicia Troßmann, Daniel Petras, Hannes Link   +4 more
doaj   +1 more source

Accession barcodes

, 2018
List of barcodes file for all accessions included in this study as well as some accessions not used but included on the same sequencing ...
Tank, David C., Gilman, Ian S.
core   +1 more source

A Pan‐Methylome Framework for Population‐Scale Bacterial Epigenomics

Advanced Science, EarlyView.
A scalable quantitative framework unlocks population‐level comparative epigenomics in bacteria. By transforming site‐level data into standardized traits, this approach reconstructs methylation‐informed phylogenies and defines the core epigenome.
Bin Ma, Huimin Gong, Ran Zhuo, Zaixiao Rao, Yanxi Wan, Mingyang Wang, Zahra Zeinalzadeh, Yuan Gao, Aohan Guan, Xinrun Li, Wanting Chen, Xiliang Wang, Yun Wan, Sihua Zhang, Yuncai Xiao, Qi Huang, Paul R. Langford, Xiangru Wang, Rui Zhou, Rui Luo, Hongbo Zhou, Chengliang Zhu, Hui Jin   +22 more
wiley   +1 more source

Barcodes for genomes and applications

, 2008
Background Each genome has a stable distribution of the combined frequency for each k-mer and its reverse complement measured in sequence fragments as short as 1000 bps across the whole genome, for 1k-mer frequency distributions is unique to each genome ...
Fengfeng Zhou, Ying Xu, Xu Ying, Zhou Fengfeng, Victor Olman, Olman Victor   +5 more
core   +1 more source