Results 251 to 260 of about 6,391,316 (304)

Pattern Based Sequence Classification

IEEE Transactions on Knowledge and Data Engineering, 2016
Sequence classification is an important task in data mining. We address the problem of sequence classification using rules composed of interesting patterns found in a dataset of labelled sequences and accompanying class labels. We measure the interestingness of a pattern in a given class of sequences by combining the cohesion and the support of the ...
Cheng Zhou, Boris Cule, Bart Goethals
openaire   +4 more sources

Itemset Based Sequence Classification

2013
Sequence classification is an important task in data mining. We address the problem of sequence classification using rules composed of interesting itemsets found in a dataset of labelled sequences and accompanying class labels. We measure the interestingness of an itemset in a given class of sequences by combining the cohesion and the support of the ...
Cheng Zhou, Boris Cule, Bart Goethals
openaire   +3 more sources

Position-based sequence weights

Journal of Molecular Biology, 1994
Sequence weighting methods have been used to reduce redundancy and emphasize diversity in multiple sequence alignment and searching applications. Each of these methods is based on a notion of distance between a sequence and an ancestral or generalized sequence.
S, Henikoff, J G, Henikoff
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Skim-Based Genotyping by Sequencing

2014
Genotyping by sequencing (GBS) is a relatively new method used to determine the differences in the genetic makeup of individuals. Its novelty stems from a combination of two already available methods: genotyping and next-generation sequencing. Depending on the individual study design GBS protocols can take multiple forms, however most share a sequence ...
Golicz, Agnieszka A., Bayer, Philipp E., Edwards, David   +2 more
openaire   +5 more sources

Filtering Bio-sequence Based on Sequence Descriptor

2006
Study on biological sequence database similarity searching has received substantial attention in the past decade, especially after the sequencing of the human genome. As a result, with larger and larger increases in database sizes, fast similarity search is becoming an important issue.
Te-Wen Hsieh, Huang-Cheng Kuo, Jen-Peng Huang   +2 more
openaire   +2 more sources

Data base for protein sequences

Proceedings of the June 7-10, 1976, national computer conference and exposition on - AFIPS '76, 1976
Proteins are linear polymers synthesized in living organisms from twenty different kinds of amino acids according to the message carried in the chromosomes. Typically, they have evolved by natural selection over hundreds of millions of years through many small changes in sequence.
Margaret Oakley Dayhoff, Winona C. Barker, R. M. Schwartz, Bruce C. Orcutt, Lois T. Hunt   +4 more
openaire   +1 more source

Sequence-based MicroRNA Clustering

Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies, 2016
MicroRNAs (miRNAs) play important roles in post-transcriptional gene regulation. Altogether, understanding integrative and co-operative activities in gene regulation is conjugated with identification of miRNA families. In current applications, the identification of such groups of miRNAs is only investigated by the projections of their expression ...
Kübra Narci, Hasan Ogul, Mahinur S. Akkaya   +2 more
openaire   +1 more source

Sequencing-Based Typing of HLA

2007
Human leukocyte antigen (HLA) typing is largely performed by use of PCR-based techniques in patients that require stem cell transplantation. In this chapter, HLA typing by sequencing-based typing techniques is described.
Berthold, Hoppe, Abdulgabar, Salama
openaire   +2 more sources

GafFour and sequence-based lighting

ACM SIGGRAPH 2018 Talks, 2018
Sequence-based lighting has become increasingly popular to further improve efficiency at Imageworks as we are producing thousands of full CG shots each year. However, Katana slows down dramatically as the lighting setup becomes more complicated to accommodate the growing number of nodes which may make up the different shots.
Xinling Chen, Lucas Miller
openaire   +2 more sources

Sequencing-based analysis of microbiomes

Nature Reviews Genetics
Microbiomes occupy a range of niches and, in addition to having diverse compositions, they have varied functional roles that have an impact on agriculture, environmental sciences, and human health and disease. The study of microbiomes has been facilitated by recent technological and analytical advances, such as cheaper and higher-throughput DNA and RNA
Yishay Pinto, Ami S. Bhatt
openaire   +2 more sources