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Approximate Bayesian Inference [PDF]

open access: yesEntropy, 2020
This is the Editorial article summarizing the scope of the Special Issue: Approximate Bayesian Inference.
Pierre Alquier
doaj   +5 more sources

MrBayes 3: Bayesian phylogenetic inference under mixed models [PDF]

open access: bronzeBioinform., 2003
MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic evolutionary models.
Fredrik Ronquist, John P. Huelsenbeck
openalex   +2 more sources

Bayesian Inference in Numerical Cognition: A Tutorial Using JASP

open access: yesJournal of Numerical Cognition, 2020
Researchers in numerical cognition rely on hypothesis testing and parameter estimation to evaluate the evidential value of data. Though there has been increased interest in Bayesian statistics as an alternative to the classical, frequentist approach to ...
Thomas J. Faulkenberry   +2 more
doaj   +2 more sources

Using SPM 12’s Second-Level Bayesian Inference Procedure for fMRI Analysis: Practical Guidelines for End Users

open access: yesFrontiers in Neuroinformatics, 2018
Recent debates about the conventional traditional threshold used in the fields of neuroscience and psychology, namely P < 0.05, have spurred researchers to consider alternative ways to analyze fMRI data.
Hyemin Han
exaly   +3 more sources

Universal Darwinism As a Process of Bayesian Inference

open access: yesFrontiers in Systems Neuroscience, 2016
Many of the mathematical frameworks describing natural selection are equivalent to Bayes’ Theorem, also known as Bayesian updating. By definition, a process of Bayesian Inference is one which involves a Bayesian update, so we may conclude that these ...
John Oberon Campbell
exaly   +3 more sources

Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology [PDF]

open access: greenScience, 2001
John P. Huelsenbeck   +3 more
openalex   +2 more sources

Overview of Research on Bayesian Inference and Parallel Tempering [PDF]

open access: yesJisuanji kexue, 2023
Bayesian inference is one of the main problems in statistics.It aims to update the prior knowledge of the probability distribution model based on the observation data.For the posterior probability that cannot be observed or is difficult to directly ...
ZHAN Jin, WANG Xuefei, CHENG Yurong, YUAN Ye
doaj   +1 more source

UltraNest - a robust, general purpose Bayesian inference engine [PDF]

open access: yesJournal of Open Source Software, 2021
UltraNest is a general-purpose Bayesian inference package for parameter estimation and model comparison. It allows fitting arbitrary models specified as likelihood functions written in Python, C, C++, Fortran, Julia or R.
J. Buchner
semanticscholar   +1 more source

Bayesian causal inference: a critical review [PDF]

open access: yesPhilosophical Transactions of the Royal Society A, 2022
This paper provides a critical review of the Bayesian perspective of causal inference based on the potential outcomes framework. We review the causal estimands, assignment mechanism, the general structure of Bayesian inference of causal effects and ...
Fan-qun Li, Peng Ding, F. Mealli
semanticscholar   +1 more source

RL with KL penalties is better viewed as Bayesian inference [PDF]

open access: yesConference on Empirical Methods in Natural Language Processing, 2022
Reinforcement learning (RL) is frequently employed in fine-tuning large language models (LMs), such as GPT-3, to penalize them for undesirable features of generated sequences, such as offensiveness, social bias, harmfulness or falsehood.
Tomasz Korbak, Ethan Perez, C. Buckley
semanticscholar   +1 more source

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