Results 31 to 40 of about 280,000 (306)

Bioinformatic analysis of maize gene encoding starch branching enzyme SBEIIb.

Plant Varieties Studying and Protection, 2016
Purpose. Investigation of maize ae1 gene polymorphism by bioinformatic methods. Methods. Global and local alignment of the nucleotide and amino acid sequences, in silico translation and transcription, translates modeling, pri­mers design, phylogenetic ...
Г. І. Сліщук, Т. Ю. Жернаков, Н. Е. Волкова   +2 more
doaj   +1 more source

Bioinformatic commands used for generating consensus sequences.

, 2023
Bioinformatic commands used for generating consensus sequences.
Diego G. Diel (3154776), Leonardo Cardia Caserta (15852725), Jianqiang Zhang (613834), Pablo Piñeyro (426131)   +3 more
core   +1 more source

Diagram-of-bioinformatic-pipelines

, 2012
Diagram-of-bioinformatic ...
Bodles, William, Buggs, Richard, Alan Watson Featherstone (3285507), Marian Thomson (3285516), Robert Crawford (3285531), Richard Buggs (3285528), Harriet Hunt (226067), William Bodles (3285525), Nian Wang (215195), Crawford, Robert, Watson Featherstone, Alan, Thomson, Marian, Hunt, Harriet, Wang, Nian   +13 more
core   +1 more source

Amplicon sequence bioinformatic analyses

, 2021
Linux shell scripts documenting the full bioinformatic pathway used to analyse amplicon sequence data for pmoA, amoA, hzo, nirS, and mcrA genes.
Dave Clark (10711899)
core   +1 more source

Microsatellite density landscapes illustrate short tandem repeats aggregation in the complete reference human genome

BMC Genomics
Background Microsatellites are increasingly realized to have biological significance in human genome and health in past decades, the assembled complete reference sequence of human genome T2T-CHM13 brought great help for a comprehensive study of short ...
Yun Xia, Douyue Li, Tingyi Chen, Saichao Pan, Hanrou Huang, Wenxiang Zhang, Yulin Liang, Yongzhuo Fu, Zhuli Peng, Hongxi Zhang, Liang Zhang, Shan Peng, Ruixue Shi, Xingxin He, Siqian Zhou, Weili Jiao, Xiangyan Zhao, Xiaolong Wu, Lan Zhou, Jingyu Zhou, Qingjian Ouyang, You Tian, Xiaoping Jiang, Yi Zhou, Shiying Tang, Junxiong Shen, Kazusato Ohshima, Zhongyang Tan   +27 more
doaj   +1 more source

The Clinical Significance and Transcription Regulation of a DNA Damage Repair Gene, SMC4, in Low-Grade Glioma via Integrated Bioinformatic Analysis

Frontiers in Oncology, 2021
Glioma is the most common type of malignant tumor in the central nervous system with an unfavorable prognosis and limited treatment. In this study, we are devoted to addressing the prognostic value of DNA damage repair-related genes in low-grade glioma ...
Yan Wang, Zhisheng Wu
doaj   +1 more source

Bioinformatic scripts

, 2015
Full scripts for bioinformatic pipeline as applied for sequence data analysis for Geisen et al.
Bonkowski, Michael, de Groot, G. Arjen, Antón Vizcaíno (3256647), Laros, Ivo, Vizcaíno, Antón, Stefan Geisen (3256650), G. Arjen de Groot (231852), Ivo Laros (3256644), Geisen, Stefan, Michael Bonkowski (458751)   +9 more
core   +1 more source

Design and analysis strategies for robust microbiome ageing research

FEBS Letters, EarlyView.
The gut microbiome changes with age and associates with age‐related morbidity and mortality, establishing it as a potential biomarker and intervention target for ageing. Realising this potential requires methodological rigour, yet distinguishing biological signals from methodological artefacts remains challenging across cohorts. This review provides an
Mark Olenik, İsmail Güderer, Yi Wang, Tayyaba Alvi, Prasoon Pandey, Handan Melike Dönertaş   +5 more
wiley   +1 more source

ABL kinase‐dependent phosphorylation of SH proteins promotes their direct interaction with CRK family SH2 domains

FEBS Letters, EarlyView.
CT10 regulator of kinase (CRK) and CRK‐Like (CRKL) are signaling adaptors driving cell adhesion, motility, differentiation, and proliferation. SH2‐domain containing (SH) proteins are enriched in YXXP motifs which when phosphorylated create preferred binding sites for CRK family SH2 domains.
Phoebe M. Cousens, Brendan W. Chandler, Anna M. Schmoker, Jaye L. Weinert, Charlotte A. Kearns, Warren T. Yacawych, Amila Šemić, Alicia M. Ebert, Bryan A. Ballif   +8 more
wiley   +1 more source

Ironing out the conflicts: iron supplementation reduces negatives bacterial interactions in the rhizosphere of an Atacama-endemic perennial grass

Environmental Microbiome
Background In plants, root exudates selectively influence the growth of bacteria that colonize the rhizosphere. Bacterial communities associated with root systems are involved in macro and micronutrients cycling and organic matter transformation.
Constanza Aguado-Norese, Jonathan E. Maldonado, Christian Hodar, Gabriel Galvez, Daniel E. Palma, Verónica Cambiazo, Mauricio Gonzalez   +6 more
doaj   +1 more source