Incorporation of Korean Electronic Data Interchange Vocabulary into Observational Medical Outcomes Partnership Vocabulary [PDF]
Healthcare Informatics Research, 2021 Objectives We incorporated the Korean Electronic Data Interchange (EDI) vocabulary into Observational Medical Outcomes Partnership (OMOP) vocabulary using a semi-automated process.
Yeonchan Seong +9 more
doaj +1 more source
Standardized Database of 12-Lead Electrocardiograms with a Common Standard for the Promotion of Cardiovascular Research: KURIAS-ECG [PDF]
Healthcare Informatics Research, 2023 Objectives Electrocardiography (ECG)-based diagnosis by experts cannot maintain uniform quality because individual differences may occur. Previous public databases can be used for clinical studies, but there is no common standard that would allow ...
Hakje Yoo +10 more
doaj +1 more source
Terminological Resources for Biologically Inspired Design and Biomimetics: Evaluation of the Potential for Ontology Reuse. [PDF]
Biomimetics (Basel)Yargan D, Jansen L.
europepmc +2 more sources
bioRxiv, 2021 The commonly used Entity-Quality (EQ) syntax provides rich semantics and high granularity for annotating phenotypes and characters using ontologies. However, EQ syntax might be time inefficient if this granularity is unnecessary for downstream analysis ...
S. Tarasov, I. Mikó, M. Yoder
semanticscholar +1 more source
Choosing preferable labels for the Japanese translation of the Human Phenotype Ontology [PDF]
Genomics & Informatics, 2020 The Human Phenotype Ontology (HPO) is the de facto standard ontology to describe human phenotypes in detail, and it is actively used, particularly in the field of rare disease diagnoses.
Kota Ninomiya +4 more
doaj +1 more source
Knowledge Discovery from Biomedical Ontologies in Cross Domains. [PDF]
PLoS ONE, 2016 In recent years, there is an increasing demand for sharing and integration of medical data in biomedical research. In order to improve a health care system, it is required to support the integration of data by facilitating semantic interoperability ...
Feichen Shen, Yugyung Lee
doaj +1 more source
Quality assurance and enrichment of biological and biomedical ontologies and terminologies
BMC Medical Informatics and Decision Making, 2020 Biological and biomedical ontologies and terminologies are used to organize and store various domain-specific knowledge to provide standardization of terminology usage and to improve interoperability.
Ankur Agrawal, Licong Cui
doaj +1 more source
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies
bioRxiv, 2021 Biological ontologies are used to organize, curate, and interpret the vast quantities of data arising from biological experiments. While this works well when using a single ontology, integrating multiple ontologies can be problematic, as they are ...
Rebecca C. Jackson +24 more
semanticscholar +1 more source
Ontologizing health systems data at scale: making translational discovery a reality
npj Digital Medicine, 2023 Common data models solve many challenges of standardizing electronic health record (EHR) data but are unable to semantically integrate all of the resources needed for deep phenotyping.
Tiffany J. Callahan +31 more
doaj +1 more source
New and revised gene ontology biological process terms describe multiorganism interactions critical for understanding microbial pathogenesis and sequences of concern. [PDF]
J Biomed SemanticsGodbold G, Proescher J, Gaudet P.
europepmc +2 more sources