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Frustration in biomolecules [PDF]
Quarterly Reviews of Biophysics, 2014 AbstractBiomolecules are the prime information processing elements of living matter. Most of these inanimate systems are polymers that compute their own structures and dynamics using as input seemingly random character strings of their sequence, following which they coalesce and perform integrated cellular functions. In large computational systems with
Ferreiro, Diego U. +2 more
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, 2018 The osteochondral defect (OD) comprises the articular cartilage and its subchondral bone. The treatment of these lesions remains as one of the most problematic clinical issues, since these defects include different tissues, requiring distinct healing approaches.
Oliveira, Isabel M. +5 more
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Mercury and selenium binding biomolecules in terrestrial mammals (Cervus elaphus and Sus scrofa) from a mercury exposed area [PDF]
, 2017 Acknowledgements The authors are grateful to Junta de Comunidades de Castilla-La Mancha (PCC-05-004-2, PAI06-0094, PCI-08-0096, PEII09-0032-5329) and the Ministerio de Economía y Competitividad (CTQ2013-48411-P) for financial support. M.J.
Fariñas, N. Rodríguez +5 more
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Interacting with the biomolecular solvent accessible surface via a haptic feedback device [PDF]
, 2009 Background: From the 1950s computer based renderings of molecules have been produced to aid researchers in their understanding of biomolecular structure and function.
Hayward, Steven +2 more
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Physical Review E, 2005 Identical objects, regularly assembled, form a helix, which is the principal motif of nucleic acids, proteins, and viral capsids.
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A GPU-accelerated Direct-sum Boundary Integral Poisson-Boltzmann Solver [PDF]
, 2013 In this paper, we present a GPU-accelerated direct-sum boundary integral method to solve the linear Poisson-Boltzmann (PB) equation. In our method, a well-posed boundary integral formulation is used to ensure the fast convergence of Krylov subspace based
Geng, Weihua, Jacob, Ferosh
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Development of a combined surface plasmon resonance/surface acoustic wave device for the characterization of biomolecules [PDF]
, 2009 It is known that acoustic sensor devices, if operated in liquid phase, are sensitive not just to the mass of the analyte but also to various other parameters, such as size, shape, charge and elastic constants of the analyte as well as bound and viscously
Achilleas Tsortos +7 more
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PDBTM: Protein Data Bank of transmembrane proteins after 8 years [PDF]
, 2012 The PDBTM database (available at http://pdbtm .enzim.hu), the first comprehensive and up-to-date transmembrane protein selection of the Protein Data Bank, was launched in 2004.
Bass +33 more
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, 2015 Oceans include the greatest extremes of pressure, temperature and light, and habitats can range from tropical waters to ocean trenches, several kilometers below sea level at high pressure. With its 70% of the surface of our planet marine ecosystem still remains largely unexplored, understudied and underexploited in comparison with terrestrial ...
Trincone, Antonio +2 more
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Programmable Biomolecule-Mediated Processors
Journal of the American Chemical Society, 2023 Programmable biomolecule-mediated computing is a new computing paradigm as compared to contemporary electronic computing. It employs nucleic acids and analogous biomolecular structures as information-storing and -processing substrates to tackle computational problems.
Jian-Jun Shu +3 more
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