Biophysics in Africa: challenges, priorities, and hopes [PDF]
This report is a serious call to scientists, innovators, investors, and policymakers to invest in the development of biophysics in Africa. The complex problems of our day demand multidisciplinary approaches, and biophysics offers training in much-needed multi- and cross-disciplinary thinking.
arxiv
Closed-Form Test Functions for Biophysical Sequence Optimization Algorithms [PDF]
There is a growing body of work seeking to replicate the success of machine learning (ML) on domains like computer vision (CV) and natural language processing (NLP) to applications involving biophysical data. One of the key ingredients of prior successes in CV and NLP was the broad acceptance of difficult benchmarks that distilled key subproblems into ...
arxiv
Stochastic biophysical modeling of irradiated cells [PDF]
The paper presents a computational stochastic model of virtual cells irradiation, based on Quasi-Markov Chain Monte Carlo method and using biophysical input. The model is based on a stochastic tree of probabilities for each cell of the entire colony.
arxiv
Thermodynamically Consistent Coarse-Graining of Polymers [PDF]
Book Chapter from "Coarse-Grained Modeling of Biomolecules" part of the submitted "Series in Computational Biophysics"
arxiv
Improving 3D deep learning segmentation with biophysically motivated cell synthesis [PDF]
Biomedical research increasingly relies on 3D cell culture models and AI-based analysis can potentially facilitate a detailed and accurate feature extraction on a single-cell level. However, this requires for a precise segmentation of 3D cell datasets, which in turn demands high-quality ground truth for training.
arxiv
Study of Brain Cells in Neurodegenerative Diseases: Raman Microspectroscopy and Scanning Ion-Conductance Microscopy. [PDF]
Morozova KI+8 more
europepmc +1 more source
B-cell interleukin 1 receptor 1 modulates the female adipose tissue immune microenvironment during aging. [PDF]
Carey A+6 more
europepmc +1 more source
Revisiting lipid nanoparticle composition and structure: A critical take on simulation approaches. [PDF]
Trollmann MFW, Rossetti P, Böckmann RA.
europepmc +1 more source
Reply to Trollmann et al.: Perspective on LNP structure and simulation. [PDF]
Garaizar A+9 more
europepmc +1 more source