Ancient hybridization and phylogenetic discordance: Exploring evolutionary complexity in Asteraceae
Abstract Premise Conflicting phylogenetic signals are common in plant phylogenomics and often reflect evolutionary histories shaped by processes like hybridization, incomplete lineage sorting, and whole‐genome duplication (WGD). We aimed to identify and assess these complex processes in the hyper‐diverse family Asteraceae to offer insight into the ...
Paige A. Ellestad +6 more
wiley +1 more source
Near-complete genome sequence of a rhabdovirus identified from the rice pest <i>Stenchaetothrips biformis</i>. [PDF]
Ma L-L, Li J-M, Huang H-J.
europepmc +1 more source
HybSuite: An integrated pipeline for hybrid capture phylogenomics from reads to trees
Abstract Premise Hybrid capture sequencing (Hyb‐Seq) is a widely used approach in phylogenomics, providing efficient access to targeted genomic regions. However, deriving high‐quality phylogenetic trees from raw sequencing reads requires extensive bioinformatics processing, which increases complexity, the risk of errors, and challenges in file ...
Yu‐Xuan Liu +8 more
wiley +1 more source
Progress in the molecular phylogeny of Cotesia acuminata and C. melitaearum cryptic species complexes. [PDF]
Schach J, Valerio F, Duplouy A.
europepmc +1 more source
tanggle: An R package for the visualization of phylogenetic networks
Abstract Premise Phylogenetic trees depict evolutionary relationships among taxa. However, they are strictly bifurcating structures that do not take into account several types of evolutionary events such as horizontal gene transfer, hybridization, or introgression. Although the development of new methods in phylogenetic networks has recently increased,
Klaus Schliep +6 more
wiley +1 more source
Correction: A transmission relationship investigation of HIV infection through male-to-male sex among a case of left-behind children with heterosexual orientation in Zhejiang Province of China. [PDF]
Hou Z +7 more
europepmc +1 more source
Abstract Premise DNA barcoding for timber species identification requires comprehensive reference datasets, informative DNA barcodes, and cost‐effective protocols. We developed a workflow leveraging Hyb‐Seq (target capture sequencing and genome skimming) to address these challenges, and we tested it on four genera from the mahogany family (Meliaceae ...
Sidonie Bellot +14 more
wiley +1 more source
A Predictive MRI Radiomics Model for Histologic Differentiation in Soft Tissue Sarcomas. [PDF]
Perronne L +16 more
europepmc +1 more source
Morphological variation in atlas and axis of Neotropical spiny rats (Rodentia, Echimyidae)
Abstract The unique morphologies of the first two cervical vertebrae, the atlas and axis, represent a significant innovation in mammalian evolution. These structures support the weight of the head and enable intricate movements of the head and neck.
Thomas Furtado da Silva Netto +3 more
wiley +1 more source
The complete chloroplast genome of <i>Polygala fallax</i> hemsl. (polygalaceae), a medicinal plant in China. [PDF]
Huang Z, Luo J.
europepmc +1 more source

