Whole-Genome Sequence Analysis of Bombella intestini LMG 28161T, a Novel Acetic Acid Bacterium Isolated from the Crop of a Red-Tailed Bumble Bee, Bombus lapidarius. [PDF]
PLoS ONE, 2016 The whole-genome sequence of Bombella intestini LMG 28161T, an endosymbiotic acetic acid bacterium (AAB) occurring in bumble bees, was determined to investigate the molecular mechanisms underlying its metabolic capabilities.
Leilei Li +7 more
doaj +20 more sources
Protein language models uncover carbohydrate-active enzyme function in metagenomics [PDF]
BMC BioinformaticsBackground The functional annotation of uncharacterized microbial enzymes from metagenomic data remains a significant challenge, limiting our understanding of microbial metabolic dynamics.
Kumar Thurimella +9 more
doaj +2 more sources
CBMDB: A Database for Accessing, Analyzing, and Mining CBM Information
Applied Sciences, 2022 Carbohydrate-binding modules (CBMs) are important substrate-binding domains that are mainly contained within carbohydrate-active enzymes. To elucidate the mechanism of enzyme-carbohydrate recognition and to promote the process of enzymatic engineering ...
Xu Lin +5 more
doaj +1 more source
A Comprehensive Phylogenetic and Bioinformatics Survey of Lectins in the Fungal Kingdom
Journal of Fungi, 2021 Fungal lectins are a large family of carbohydrate-binding proteins with no enzymatic activity. They play fundamental biological roles in the interactions of fungi with their environment and are found in many different species across the fungal kingdom ...
Annie Lebreton +5 more
doaj +1 more source
Performance of different rice-based cropping systems in the wet temperate zone of Himachal Pradesh
Environment Conservation Journal, 2023 A field experiment to diversify the rice‒wheat system to increase employment and income was conducted during 2017-18 at the research farm of CSK Himachal Pradesh Krishi Vishwavidyalaya Palampur with eight cropping systems that were replicated four times.
Avnee Mandial +3 more
doaj +1 more source
Galectins: Their Network and Roles in Infection/Immunity/Tumor Growth Control 2021
Biomolecules, 2022 Galectins constitute a protein family of soluble and non-glycosylated animal lectins that show a β-galactoside-binding activity via a conserved sequence of approximately 130–140 amino acids located in the carbohydrate recognition domain (CRD) [...]
Toshio Hattori
doaj +1 more source
Advancing Solutions to the Carbohydrate Sequencing Challenge [PDF]
Journal of the American Chemical Society, 2019 Carbohydrates possess a variety of distinct features with stereochemistry playing a particularly important role in distinguishing their structure and function. Monosaccharide building blocks are defined by a high density of chiral centers. Additionally, the anomericity and regiochemistry of the glycosidic linkages carry important biological information.
Christopher J. Gray +10 more
openaire +4 more sources
Molecular Cloning and Characteristics of a Lectin from the Bivalve Glycymeris yessoensis
Marine Drugs, 2023 C-type lectins (CTLs) are a family of carbohydrate-binding proteins that mediate multiple biological events, including adhesion between cells, the turnover of serum glycoproteins, and innate immune system reactions to prospective invaders.
Tatyana O. Mizgina +9 more
doaj +1 more source
Galectin-12 in Cellular Differentiation, Apoptosis and Polarization. [PDF]
, 2018 Galectin-12 is a member of a family of mammalian lectins characterized by their affinity for β-galactosides and consensus amino acid sequences. The protein structure consists of a single polypeptide chain containing two carbohydrate-recognition domains ...
Liu, Fu-Tong, Wan, Lei, Yang, Ri-Yao
core +5 more sources
Complete genome sequence data of chitin-degrading Bacillus velezensis RB.IBE29
Data in Brief, 2023 This work reports the complete genome sequence of chitinolytic Bacillus velezensis RB.IBE29 recently isolated from the rhizosphere of black pepper cultivated in the Central Highlands region of Vietnam.
Dinh Minh Tran +2 more
doaj +1 more source