Results 101 to 110 of about 617,908 (340)
Reverse Engineering Chemical Reaction Networks from Time Series Data [PDF]
arXiv.org, 2012 The automated inference of physically interpretable (bio)chemical reaction network models from measured experimental data is a challenging problem whose solution has significant commercial and academic ramifications. It is demonstrated, using simulations,
Dominic P. Searson +2 more
semanticscholar +1 more source
Reaction Brownian Dynamics and the effect of spatial fluctuations on the gain of a push-pull network
, 2008 Brownian Dynamics algorithms are widely used for simulating soft-matter and biochemical systems. In recent times, their application has been extended to the simulation of coarse-grained models of cellular networks in simple organisms.
Frenkel D. +4 more
core +1 more source
FRECKLL: Full and Reduced Exoplanet Chemical Kinetics DistiLLed
The Astrophysical JournalWe introduce a new Python 1D chemical kinetic code, Full and Reduced Exoplanet Chemical Kinetics distiLLed ( FRECKLL ), to evolve large chemical networks efficiently.
Ahmed Faris Al-Refaie +3 more
doaj +1 more source
Minimal model for oscillatory dynamics of a nonlinear chemical reaction network
Physica D: Nonlinear Phenomena, 2022 Since Bray's pioneering discovery exactly 100 years ago of the first oscillating reaction, more than 25 families of nonlinear oscillating reaction networks have been identified. The B–Z reaction network has been expanded, and complex models considering a score of chemical reactions and species have been developed.
openaire +2 more sources
FEBS Letters, EarlyView.In lymphoid organs, antigen recognition and B cell receptor signaling rely on integrins and the cytoskeleton. Integrins act as mechanoreceptors, couple B cell receptor activation to cytoskeletal remodeling, and support immune synapse formation as well as antigen extraction.
Abhishek Pethe, Tanja Nicole Hartmann
wiley +1 more source
Nature Communications, 2022 Dynamic, transient, out-of-equilibrium networks guide cellular genetic, metabolic or signaling processes. Designing synthetic networks emulating natural processes imposes important challenges including the ordered connectivity of transient reaction ...
Jianbang Wang, Zhenzhen Li, I. Willner
semanticscholar +1 more source
Multiple equilibria in complex chemical reaction networks: extensions to entrapped species models [PDF]
IEE Proceedings - Systems Biology, 2006 In two earlier papers, means were provided to decide the capacity of complex chemical reaction networks, taken with mass-action kinetics, to admit multiple equilibria in the context of the isothermal homogeneous continuous flow stirred tank reactor (CFSTR).
Gheorghe Craciun, Martin Feinberg
openaire +3 more sources
miRNA‐29 regulates epidermal and mesenchymal functions in skin repair
FEBS Letters, EarlyView.miRNA‐29 inhibits cell‐to‐cell and cell‐to‐matrix adhesion by silencing mRNA targets. Adhesion is controlled by complex interactions between many types of molecules coded by mRNAs. This is crucial for keeping together the layers of the skin and for regenerating the skin after wounding.
Lalitha Thiagarajan +10 more
wiley +1 more source
Network-level analysis of damage in amine-crosslinked diglycidyl ether resins degraded by acid
eXPRESS Polymer Letters, 2022 Amine-crosslinked epoxy resins represent a large fraction of polymers used in structural and coating applications, meaning the characterization and modeling of environmental durability and mechanical reliability is of utmost importance.
Jonathon Tanks +2 more
doaj +1 more source
FEBS Letters, EarlyView.Spot‐14 and Spot‐14R play distinct roles in regulating metabolism in brown and beige adipocytes. While both influence lipid and glucose pathways, Spot‐14 uniquely controls thermogenic gene expression. This dual regulation balances energy storage and heat production, highlighting potential therapeutic targets for obesity and metabolic disorders. Spot 14
Lidia Itzel Castro‐Rodríguez +3 more
wiley +1 more source