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Chloroplast genomes of four Carex species: Long repetitive sequences trigger dramatic changes in chloroplast genome structure

open access: yesFrontiers in Plant Science, 2023
The chloroplast genomes of angiosperms usually have a stable circular quadripartite structure that exhibits high consistency in genome size and gene order.
Shenjian Xu   +7 more
doaj   +2 more sources

Insights into the phylogeny and chloroplast genome evolution of Eriocaulon (Eriocaulaceae)

open access: yesBMC Plant Biology, 2023
Background Eriocaulon is a wetland plant genus with important ecological value, and one of the famous taxonomically challenging groups among angiosperms, mainly due to the high intraspecific diversity and low interspecific variation in the morphological ...
Enze Li   +6 more
semanticscholar   +1 more source

The complete chloroplast genome of Onobrychis gaubae (Fabaceae-Papilionoideae): comparative analysis with related IR-lacking clade species

open access: yesBMC Plant Biology, 2021
Plastome (Plastid genome) sequences provide valuable markers for surveying evolutionary relationships and population genetics of plant species. Papilionoideae (papilionoids) has different nucleotide and structural variations in plastomes, which makes it ...
M. Moghaddam   +4 more
semanticscholar   +1 more source

Newly reported chloroplast genome of Sinosenecio albonervius Y. Liu & Q. E. Yang and comparative analyses with other Sinosenecio species

open access: yesBMC Genomics, 2022
Background Sinosenecio B. Nordenstam (Asteraceae) currently comprises 44 species. To investigate the interspecific relationship, several chloroplast markers, including ndhC - trnV , rpl32-trnL , matK , and rbcL , are used to analyze the phylogeny of ...
Jing Peng   +7 more
semanticscholar   +1 more source

Anticodon table of the chloroplast genome and identification of putative quadruplet anticodons in chloroplast tRNAs

open access: yesScientific Reports, 2023
The chloroplast genome of 5959 species was analyzed to construct the anticodon table of the chloroplast genome. Analysis of the chloroplast transfer ribonucleic acid (tRNA) revealed the presence of a putative quadruplet anticodon containing tRNAs in the ...
Tapan Kumar Mohanta   +2 more
doaj   +1 more source

Chloroplast Genome Evolution and Species Identification of Styrax (Styracaceae)

open access: yesBioMed Research International, 2022
The genus Styrax L. consists of approximately 130 species distributed in the Americas, eastern Asia, and the Mediterranean region. The phylogeny and evolutionary history of this genus are not clear.
Yun Song   +4 more
semanticscholar   +1 more source

Green giant—a tiny chloroplast genome with mighty power to produce high‐value proteins: history and phylogeny

open access: yesPlant Biotechnology Journal, 2021
Summary Free‐living cyanobacteria were entrapped by eukaryotic cells ~2 billion years ago, ultimately giving rise to chloroplasts. After a century of debate, the presence of chloroplast DNA was demonstrated in the 1960s.
H. Daniell   +5 more
semanticscholar   +1 more source

Chloroplast Genome Traits Correlate With Organismal Complexity and Ecological Traits in Chlorophyta

open access: yesFrontiers in Ecology and Evolution, 2021
A positive relationship between cell size and chloroplast genome size within chloroplast-bearing protists has been hypothesized in the past and shown in some case studies, but other factors influencing chloroplast genome size during the evolution of ...
Jiao Fang   +7 more
doaj   +1 more source

The chloroplast genome evolution of Venus slipper (Paphiopedilum): IR expansion, SSC contraction, and highly rearranged SSC regions

open access: yesBMC Plant Biology, 2021
Paphiopedilum is the largest genus of slipper orchids. Previous studies showed that the phylogenetic relationships of this genus are not well resolved, and sparse taxon sampling documented inverted repeat (IR) expansion and small single copy (SSC ...
Yan-Yan Guo   +4 more
semanticscholar   +1 more source

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