Results 41 to 50 of about 114,502 (161)

Complete Chloroplast Genome of the Inverted Repeat-Lacking Species Vicia bungei and Development of Polymorphic Simple Sequence Repeat Markers

Frontiers in Plant Science, 2022
BackgroundVicia bungei is an economically important forage crop in South Korea and China. Although detailed genetic and genomic data can improve population genetic studies, conservation efforts, and improved breeding of crops, few such data are available
Ick-Hyun Jo, Seahee Han, Donghwan Shim, Hojin Ryu, Tae Kyung Hyun, Yi Lee, Daeil Kim, Yoon-Sup So, Jong-Wook Chung   +8 more
doaj   +1 more source

Finding the Core-Genes of Chloroplasts

, 2014
Due to the recent evolution of sequencing techniques, the number of available genomes is rising steadily, leading to the possibility to make large scale genomic comparison between sets of close species.
AlKindy, Bassam, Bahi, Jacques M., Couchot, Jean-François, Guyeux, Christophe, Mouly, Arnaud, Salomon, Michel   +5 more
core   +3 more sources

Tomato: a crop species amenable to improvement by cellular and molecular methods [PDF]

, 1989
Tomato is a crop plant with a relatively small DNA content per haploid genome and a well developed genetics. Plant regeneration from explants and protoplasts is feasable which led to the development of efficient transformation procedures.
A. Crossway, A. Guri, A. Hoekema, A. Kinshara, A. Morgan, A. Zelcer, A.H. Paterson, A.J. Framond De, A.L. Phillips, A.L. Phillips, A.R. Krol Van der, B. Baker, B. Baker, B. Hause, B. McClintock, B. Piechulla, B.A. Levenko, B.D. Harrison, B.L. Ward, B.P. Moens, B.R. Thomas, B.R. Thomas, B.S. Gill, B.S. Landry, B.S. Landry, B.S. Landry, C. Chang, C. Pieterse, C. Waldron, C.D. Riggs, C.E. Vallejos, C.E. Vallejos, C.J.S. Smith, C.M. Rick, C.M. Rick, C.M. Rick, C.M. Rick, C.M. Rick, C.M. Rick, C.M. Rick, C.M. Rick, C.M. Smith, C.P. Meredith, D. Boer De, D. Botstein, D. Shah, D. Zamir, D. Zamir, D. Zamir, D.A. Evans, D.A. Evans, D.M. Barker, D.M. Lonsdale, D.P. Barlow, D.W. Barton, D.W. Galbraith, E. Haute Van, E. Pichersky, E.A. Frankenberger, E.A. Frankenberger, E.A. Shahin, E.A. Shahin, E.C. Tigchelaar, F.J. Zapata, G. Gavazzi, G. Melchers, G. Schweizer, G.S. Khush, G.S. Khush, H.P. Mühlbach, I. Negrutiu, I.M. Greenblat, J. Botterman, J. Haseloff, J. Hille, J. Hille, J. Paszkowski, J. Phillips, J. Wijbrandi, J.D. Palmer, J.D. Palmer, J.D. Palmer, J.D. Palmer, J.F. Gusella, J.F. Gusella, J.F. Shepard, J.G. Atherton, J.H. Hawkes, J.I. Yoder, J.J. Fillatti, J.L. Bennetzen, J.M. van Montagu Schell, J.S. Beckmann, J.S. Beckmann, J.W. Maxon-Smith, J.W. Verna De, Jacoues Hille, K. Ohyama, K. Shinozaki, K. Umesono, K.A. Darden, K.K. Kartha, L. Herrera-Estrella, L. Herrera-Estrella, L. Marton, L.A. Miki, L.P. Hosticka, L.W. Handley, M. Block De, M. Buiatti, M. Buiatti, M. Cuozzo, M. Jongsma, M. Koornneef, M. Koornneef, M. Mutschler, M. S. Ramanna, M. Sibi, M. Soller, M. Vaeek, M. Wallroth, M. Ziv, M.A. O'Connell, M.A. O'Connell, M.A. O'Connell, M.A. O'Connell, M.A. Sluys Van, M.A. Stevens, M.A. Stevens, M.D. Bennett, M.L.M.C. Tan, M.L.M.C. Tan, M.R. Hanson, M.S. Ramanna, M.S. Ramanna, M.S. Ramanna, M.W. Bevan, M.W. Ganal, M.Y. Menzel, Maarten Koornneef, N.A. Zagorska, N.D. Young, N.D. Young, N.E. Tumer, N.V. Federoff, P. Little, P. Zambryski, P.E. McClean, P.F. Ambros, P.G. Smith, P.J.M. Elzen Van den, P.J.M. Elzen Van den, P.M. Gresshoff, Pim Zabel, R. Bernatzky, R. Bernatzky, R. Ecochard, R. Hain, R. Niedz, R.A. Bressan, R.A.J. Daelen Van, R.B. Flavell, R.B. Horsch, R.D. Locky, R.D. Shillito, R.S. Nelson, R.T. Fraley, S. Dellaporta, S. McCormick, S. Ohki, S.D. Tanksley, S.D. Tanksley, S.D. Tanksley, S.D. Tanksley, S.D. Tanksley, S.D. Tanksley, St.G. Rogers, T. Helentjaris, T. Helentjaris, T. Helentjaris, T.C. Osborn, T.L. Adams, T.M. Klein, U. Wienand, V. Padmanabhan, V.A. Hilder, W. Gottschalk, W. Gruissem, W.L. Gerlach, W.R. Sharp, Y.S. Chyi, Z. Koukolikova-Nicola, Z. Tabaeizadeh   +192 more
core   +3 more sources

The complete chloroplast genome of Allium fistulosum

Mitochondrial DNA. Part B. Resources, 2019
The complete chloroplast genome of Allium fistulosum (Bunching onion) was determined. The length of the complete chloroplast genome is 153,164 bp. The whole chloroplast genome consists of 82,237 bp long single copy (LSC) and 17,907 bp small single copy ...
Ziyoviddin Yusupov, Tao Deng, Changkun Liu, Nan Lin, Komiljon Tojibaev, Hang Sun   +5 more
doaj   +1 more source

Analysis of chloroplast genomic characteristics and phylogeny in Syzygium grijsii

Guangxi Zhiwu, 2023
Syzygium grijsii, an evergreen shrub of Myrtaceae and Syzygium, has good prospects for exploitation, but its chloroplast genome characteristics and phylogenetic relationships have not been reported. To fill the gap in the genomics of S.
Mengjie ZHANG, Xiuyao YANG, Tuo YIN, Peichen HAN, Chaojin DU, Hanyao ZHANG   +5 more
doaj   +1 more source

Chloroplast genomes of four Carex species: Long repetitive sequences trigger dramatic changes in chloroplast genome structure

Frontiers in Plant Science, 2023
The chloroplast genomes of angiosperms usually have a stable circular quadripartite structure that exhibits high consistency in genome size and gene order.
Shenjian Xu, Ke Teng, Hui Zhang, Kang Gao, Juying Wu, Liusheng Duan, Yuesen Yue, Xifeng Fan   +7 more
doaj   +1 more source

The complete chloroplast genome sequence of Enkianthus perulatus (Miq.) C.K.Schneid. (Ericaceae)

Mitochondrial DNA. Part B. Resources
Enkianthus perulatus (Miq.) C.K.Schneid. is a popular ornamental plant in Japan, for which the chloroplast genome has not been previously reported. Its complete chloroplast genome was therefore determined, using a high-throughput sequencing technique ...
Watanabe Yoichi
doaj   +1 more source

The complete chloroplast genome of Allium macrostemon

Mitochondrial DNA. Part B. Resources, 2019
The complete chloroplast genome of Allium macrostemon Bunge was determined. The length of the complete chloroplast genome is 153,158 bp. The whole chloroplast genome includes four regions: 82,700 bp long single-copy (LSC) and 17,600 bp small single-copy (
Fu-Min Xie, Qiu-Ping Jiang, Yan Yu, Song-Dong Zhou, Xing-Jin He   +4 more
doaj   +1 more source

Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure [PDF]

, 2013
Background: Most phylogeny analysis methods based on molecular sequences use multiple alignment where the quality of the alignment, which is dependent on the alignment parameters, determines the accuracy of the resulting trees.
Bakis, Yasin, Bakış, Yasin, Bilgin, Nese, Bilgin, Neşe, Meydan, Cem, Otu, Hasan H., Sezerman, Ugur, Sezerman, Uğur, Tasci, Nivart, Taşçı, Nivart, Yuzbasioglu, Sirri, Yüzbaşıoğlu, Sırrı   +11 more
core   +2 more sources

CLAW: An automated Snakemake workflow for the assembly of chloroplast genomes from long-read data.

PLoS Computational Biology
Chloroplasts are photosynthetic organelles in algal and plant cells that contain their own genome. Chloroplast genomes are commonly used in evolutionary studies and taxonomic identification and are increasingly becoming a target for crop improvement ...
Aaron L Phillips, Scott Ferguson, Rachel A Burton, Nathan S Watson-Haigh   +3 more
doaj   +1 more source