Results 11 to 20 of about 2,043,170 (278)
Normalization of a chromosomal contact map [PDF]
BMC Genomics, 2012 Abstract Background Chromatin organization has been increasingly studied in relation with its important influence on DNA-related metabolic processes such as replication or regulation of gene expression. Since its original design ten years ago, capture of chromosome conformation (3C) has become an essential tool to ...
Martial Marbouty +8 more
openaire +7 more sources
Molecular Cytogenetics in Domestic Bovids: A Review
Animals, 2023 The discovery of the Robertsonian translocation (rob) involving cattle chromosomes 1 and 29 and the demonstration of its deleterious effects on fertility focused the interest of many scientific groups on using chromosome banding techniques to reveal ...
Alessandra Iannuzzi +2 more
doaj +1 more source
Cloning, chromosome mapping and expression pattern of porcine
Genetics Selection Evolution, 2008 The PAT proteins, named after the three PLIN/ADRP/TIP47 (PAT) proteins, PLIN for perilipin, ADRP for adipose differentiation-related protein and TIP47 for tail-interacting protein of 47 kDa, now officially named M6PRBP1 for mannose-6-phosphate receptor ...
Yang Zaiqing +7 more
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From Hi-C Contact Map to Three-dimensional Organization of Interphase Human Chromosomes [PDF]
Phys. Rev. X 11, 011051 (2021), 2020 The probability of two loci, separated by a certain genome length, being in contact can be inferred using the Chromosome Conformation Capture (3C) method and related Hi-C experiments. How to go from the contact map, a matrix listing the mean contact probabilities between a large number of pairs of loci, to an ensemble of three-dimensional structures is
arxiv +1 more source
Plants, 2020 Map-based gene cloning has played a key role in many genetic studies using the model plant, Arabidopsis thaliana. In the post- next generation sequencing era, identification of point mutations and their corresponding genes is increasingly becoming a ...
Takahiro Tanaka +3 more
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Molecular Cytogenetics, 2022 Background The history of comparative chromosome mapping is briefly reviewed, with discussion about the problem that occurs in chromosome painting when size heteromorphisms between homologues cause contamination in chromosomes sorted by flow cytometry ...
Malcolm A. Ferguson-Smith +3 more
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Effective Model of Loop Extrusion Predicts Chromosomal Domains [PDF]
Phys. Rev. E 102, 032414 (2020), 2020 An active loop-extrusion mechanism is regarded as the main out--of--equilibrium mechanism responsible for the structuring of megabase-sized domains in chromosomes. We developed a model to study the dynamics of the chromosome fibre by solving the kinetic equations associated with the motion of the extruder.
arxiv +1 more source
Mitotic-chromosome-based physical mapping of the Culex quinquefasciatus genome. [PDF]
PLoS ONE, 2015 The genome assembly of southern house mosquito Cx. quinquefasciatus is represented by a high number of supercontigs with no order or orientation on the chromosomes.
Anastasia N Naumenko +9 more
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A chromosome-scale assembly of the sorghum genome using nanopore sequencing and optical mapping
Nature Communications, 2018 Long-read sequencing technologies have greatly facilitated assemblies of large eukaryotic genomes. In this paper, Oxford Nanopore sequences generated on a MinION sequencer are combined with Bionano Genomics Direct Label and Stain (DLS) optical maps to ...
S. Deschamps +7 more
semanticscholar +1 more source
Characterization analysis and polymorphism detection of the porcine Myd88 gene
Genetics and Molecular Biology, 2009 The myeloid differentiation primary response protein 88 (Myd88) is an essential adaptor protein, which mediates in all Toll-like receptor (TLR) members signal transduction, except for TLR3. In this study, the 4464 bp genomic sequence of porcine Myd88 was
Xinyun Li +6 more
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