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Prediction of SARS-CoV-2 Variant Lineages Using the S1-Encoding Region Sequence Obtained by PacBio Single-Molecule Real-Time Sequencing

Viruses, 2021
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is the causal agent of the COVID-19 pandemic that emerged in late 2019. The outbreak of variants with mutations in the region encoding the spike protein S1 sub-unit that can make them more
Sébastien Lhomme, Justine Latour, Nicolas Jeanne, Pauline Trémeaux, Noémie Ranger, Marion Migueres, Gérald Salin, Cécile Donnadieu, Jacques Izopet   +8 more
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Diversity in the Circulation of Influenza A(H3N2) Viruses in the Northern Hemisphere in the 2018–19 Season

Vaccines, 2021
While vaccination is considered the most effective means to prevent influenza infection, its seasonal effectiveness varies, depending on the circulating influenza strains.
Rakefet Pando, Shahar Stern, Ital Nemet, Aharona Glatman-Freedman, Hanna Sefty, Neta S. Zuckerman, Yaron Drori, Nehemya Friedman, John W. McCauley, Lital Keinan-Boker, Ella Mendelson, Rodney S. Daniels, Michal Mandelboim   +12 more
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Genomic Diversity of SARS-CoV-2 in Algeria and North African Countries: What We Know So Far and What We Expect?

Microorganisms, 2022
Here, we report a first comprehensive genomic analysis of SARS-CoV-2 variants circulating in North African countries, including Algeria, Egypt, Libya, Morocco, Sudan and Tunisia, with respect to genomic clades and mutational patterns. As of December 2021,
Taha Menasria, Margarita Aguilera
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Development of a Multiplex RT-qPCR for the Detection of Different Clades of Avian Influenza in Poultry

Viruses, 2020
Since the initial detection of H5N1, a highly pathogenic avian influenza (HPAI) virus, in 1996 in China, numerous HPAI H5 lineages have been classified, and they continue to pose a threat to animal and human health.
Tran Bac Le, Hye Kwon Kim, Woonsung Na, Van Phan Le, Min-Suk Song, Daesub Song, Dae Gwin Jeong, Sun-Woo Yoon   +7 more
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Temporal dynamics and fatality of SARS‐CoV‐2 variants in Bangladesh

Health Science Reports, 2023
Background and Aims Since the beginning of the SARS‐CoV‐2 pandemic, multiple new variants have emerged posing an increased risk to global public health.
M. Shaminur Rahman, M. Nazmul Hoque, Susmita Roy Chowdhury, Md. Moradul Siddique, Ovinu Kibria Islam, Syed Md. Galib, Md. Tanvir Islam, M. Anwar Hossain   +7 more
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First detection of Varicella Zoster Virus clade 9 cases in India during mpox surveillance

Annals of Medicine, 2023
Background The multi-country mpox outbreak across the globe has led to the systematic surveillance of mpox cases in India. During the surveillance of mpox, we encountered cases of Varicella Zoster Virus (VZV) in suspected mpox cases amongst children ...
Abhinendra Kumar, Lekshmi S. Rajan, Kannan Sabarinath PS, Anita M. Shete, Rima R. Sahay, Deepak Y. Patil, Nayana Ingole, Kaveri K, Anupama Cherayi Padinakarai, Shantala GB, Jayanthi Shastri, Shashiraja Padukone, Yash Joshi, Savita Patil, Triparna Majumdar, Ajay Verma, Jyoti Yemul, Nandini Shende, Vaishnavi Kumari, Pratiksha Vedpathak, Shubhangi Sathe, Pranita Gawande, Pragya D. Yadav   +22 more
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Human neutralising antibodies elicited by SARS‐CoV‐2 non‐D614G variants offer cross‐protection against the SARS‐CoV‐2 D614G variant

Clinical & Translational Immunology, 2021
Objectives The emergence of a SARS‐CoV‐2 variant with a point mutation in the spike (S) protein, D614G, has taken precedence over the original Wuhan isolate by May 2020.
Cheryl Yi‐Pin Lee, Siti Naqiah Amrun, Rhonda Sin‐Ling Chee, Yun Shan Goh, Tze‐Minn Mak, Sophie Octavia, Nicholas Kim‐Wah Yeo, Zi Wei Chang, Matthew Zirui Tay, Anthony Torres‐Ruesta, Guillaume Carissimo, Chek Meng Poh, Siew‐Wai Fong, Wang Bei, Sandy Lee, Barnaby Edward Young, Seow‐Yen Tan, Yee‐Sin Leo, David C Lye, Raymond TP Lin, Sebastien Maurer‐Stroh, Bernett Lee, Cheng‐I Wang, Laurent Renia, Lisa FP Ng   +24 more
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Molecular Analysis of SARS-CoV-2 Circulating in Bangladesh during 2020 Revealed Lineage Diversity and Potential Mutations

Microorganisms, 2021
Virus evolution and mutation analyses are crucial for tracing virus transmission, the potential variants, and other pathogenic determinants. Despite continuing circulation of the SARS-CoV-2, very limited studies have been conducted on genetic ...
Rokshana Parvin, Sultana Zahura Afrin, Jahan Ara Begum, Salma Ahmed, Mohammed Nooruzzaman, Emdadul Haque Chowdhury, Anne Pohlmann, Shyamal Kumar Paul   +7 more
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Dirofilaria immitis in Bulgaria: the first genetic baseline data and an overview of the current status

Helminthologia, 2020
Dirofilaria immitis, the agent of canine dirofilariosis, is a common parasite of domestic and wild carnivores with zoonotic potential and worldwide distribution, being endemic in many countries.
Panayotova-Pencheva M., Šnábel V., Dakova V., Čabanová V., Cavallero S., Trifonova A., Mirchev R., Hurníková Z., Vasilková Z., Miterpáková M.   +9 more
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Genetic diversity of modern lines of hybrid pigs based on variations in mitochondrial DNA sequence

Біологія тварин, 2022
In the study, we evaluated the genetic specificity of haplotypes in the population of hybrid gilts (Large White × Landrace), (Landrace × Large White) from the SPE “Globinsky Pig Complex” LLC and breeding sows of the Large White breed from the SE “DG ...
Ye. O. Budakva, K. F. Pochernyaev, S. M. Korinnyi, M. G. Povod   +3 more
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