Studies on association of coefficient of coancestry with progeny performance in sugarcane
The utilization of superior parental lines and identification of superior families enhance the genetic gain in sugarcane. To identify the superior parental lines and superior progenies, 1889 progenies derived from twenty crosses involving genetically ...
C Mahadevaiah +7 more
doaj +2 more sources
A note on the rationale for estimating genealogical coancestry from molecular markers [PDF]
Background Genetic relatedness or similarity between individuals is a key concept in population, quantitative and conservation genetics. When the pedigree of a population is available and assuming a founder population from which the genealogical records ...
García-Cortés Luis +2 more
doaj +7 more sources
Fast and accurate joint inference of coancestry parameters for populations and/or individuals. [PDF]
We introduce a fast, new algorithm for inferring from allele count data the FST parameters describing genetic distances among a set of populations and/or unrelated diploid individuals, and a tree with branch lengths corresponding to FST values.
Tristan Mary-Huard, David Balding
doaj +5 more sources
Conspecific Scaffold-Level Genome Assembly Outperforms Heterospecific Chromosome-Level Assemblies for Assessing Genetic Indicators in a Threatened Marine Fish. [PDF]
ABSTRACT Understanding the genomic architecture of species of conservation concern is essential for fostering effective conservation initiatives. Current biodiversity assessment approaches increasingly incorporate genetic metrics to evaluate the status of species and populations of conservation interest.
Ndou M +5 more
europepmc +2 more sources
Population genetics and phylogenomic insights into the origin of economically important black pepper (Piper nigrum). [PDF]
Abstract Premise We conducted population genetic and phylogenomic analyses of several cultivated Piper nigrum varieties and closely related species. We sought to establish (1) the genetic constitution of P. nigrum and its putative status as an allotetraploid hybrid of Indian origin, and (2) its relationships to other species of Piper in South and ...
Metschina D +12 more
europepmc +2 more sources
This study analyzes the evolution of the population structure and genetic diversity of Braford cattle in South America from 1949 to 2019 to suggest effective strategies for breeding in the future. The percentage of bulls historically increased.
Araceli Rocío Marisel González +5 more
doaj +1 more source
Genetic Signatures of Coancestry within Surnames [PDF]
Surnames are cultural markers of shared ancestry within human populations. The Y chromosome, like many surnames, is paternally inherited, so men sharing surnames might be expected to share similar Y chromosomes as a signature of coancestry. Such a relationship could be used to connect branches of family trees, to validate population genetic studies ...
King, Turi E. +3 more
openaire +3 more sources
In breeding, optimal contribution selection (OCS) is one of the most effective strategies to balance short‐ and long‐term genetic responses, by maximizing genetic gain and minimizing global coancestry.
Mathieu Tiret +2 more
doaj +1 more source
Inferring Coancestry in Population Samples in the Presence of Linkage Disequilibrium [PDF]
Abstract In both pedigree linkage studies and in population-based association studies there has been much interest in the use of modern dense genetic marker data to infer segments of gene identity by descent (ibd) among individuals not known to be related, to increase power and resolution in localizing genes affecting complex traits.
M D, Brown +3 more
openaire +2 more sources
Estimating Population-Level Coancestry Coefficients by an Admixture F Model [PDF]
Abstract In this article, we develop an admixture F model (AFM) for the estimation of population-level coancestry coefficients from neutral molecular markers. In contrast to the previously published F model, the AFM enables disentangling small population size and lack of migration as causes of genetic differentiation behind a given level
Karhunen, M. and Ovaskainen, O.
openaire +2 more sources

