Results 41 to 50 of about 1,091,790 (205)

Species assembly in model ecosystems, II: Results of the assembly process [PDF]

, 2010
In the companion paper of this set (Capitan and Cuesta, 2010) we have developed a full analytical treatment of the model of species assembly introduced in Capitan et al. (2009).
Bastolla, Bastolla, Capitán, Case, Case, Cohen, Drake, Drossel, Dunne, Fukami, Hofbauer, Jordi Bascompte, José A. Capitán, José A. Cuesta, Karlin, Knuth, Law, Law, Levine, Lewis, McCann, Morton, Morton, Pimm, Pimm, Post, Roughgarden, Turelli, Virgo, Warren, Xie   +30 more
core   +6 more sources

Size Shapes the Active Microbiome of Methanogenic Granules, Corroborating a Biofilm Life Cycle

mSystems, 2020
Methanogenic archaea are key players in cycling organic matter in nature but also in engineered waste treatment systems, where they generate methane, which can be used as a renewable energy source.
Anna Christine Trego, Sarah O’Sullivan, Christopher Quince, Simon Mills, Umer Zeeshan Ijaz, Gavin Collins   +5 more
doaj   +1 more source

The divergent vertical pattern and assembly of soil bacterial and fungal communities in response to short-term warming in an alpine peatland

Frontiers in Plant Science, 2022
Soil microbial communities are crucial in ecosystem-level decomposition and nutrient cycling processes and are sensitive to climate change in peatlands.
Xiaodong Wang, Xiaodong Wang, Xiaodong Wang, Yong Li, Yong Li, Yong Li, Zhongqing Yan, Zhongqing Yan, Zhongqing Yan, Yanbin Hao, Enze Kang, Enze Kang, Enze Kang, Xiaodong Zhang, Xiaodong Zhang, Xiaodong Zhang, Meng Li, Meng Li, Meng Li, Kerou Zhang, Kerou Zhang, Kerou Zhang, Liang Yan, Liang Yan, Liang Yan, Ao Yang, Ao Yang, Ao Yang, Yuechuan Niu, Xiaoming Kang, Xiaoming Kang, Xiaoming Kang   +31 more
doaj   +1 more source

Species-level functional profiling of metagenomes and metatranscriptomes. [PDF]

, 2018
Functional profiles of microbial communities are typically generated using comprehensive metagenomic or metatranscriptomic sequence read searches, which are time-consuming, prone to spurious mapping, and often limited to community-level quantification ...
A Sczyrba, A Shafquat, AE Duran-Pinedo, AK Sharma, B Buchfink, B Langmead, BE Suzek, BK Swan, C Burke, C Luo, Curtis Huttenhower, D Medini, DH Huson, DT Truong, DT Truong, E Pasolli, EA Franzosa, EA Franzosa, Eric A. Franzosa, George Weingart, GG Silva, Gholamali Rahnavard, H Hauswedell, J Kim, J Lloyd-Price, J Lloyd-Price, J Ravel, J. Gregory Caporaso, JA Fuhrman, K Huang, Karen Schwarzberg Lipson, Lauren J. McIver, LR Thompson, LR Thompson, Luke R. Thompson, M Hamady, M Kanehisa, M Scholz, Melanie Schirmer, MY Galperin, N Segata, N Segata, Nicola Segata, OU Mason, P Petrenko, PJ Turnbaugh, R Caspi, RC Edgar, RD Finn, Rob Knight, S Abubucker, S Nayfach, S Sunagawa, S Sunagawa, T Bose, UniProt Consortium., W Huang, Y Ye, Y Zhao   +58 more
core   +2 more sources

Bacterial communities exhibit apparent phosphate concentration-related patterns of community composition, alpha diversity, and phylogenetic structure in the subtropical Daya Bay

Frontiers in Marine Science, 2023
Increasing anthropogenic activities have caused serious environmental problems and undesirable ecological impacts on bay ecosystems. However, much remains to be learned regarding marine bacterial community assembly and its underlying mechanisms under ...
Ye Chen, Guibin Ma, Chuangfeng Wu, Yuyang Peng, Xingyu Song, Qinglong L. Wu, Qinglong L. Wu, Qinglong L. Wu, Bo-Ping Han, Lijuan Ren, Lijuan Ren   +10 more
doaj   +1 more source

Stochastic Assembly Leads to Alternative Communities with Distinct Functions in a Bioreactor Microbial Community

mBio, 2013
The processes and mechanisms of community assembly and its relationships to community functioning are central issues in ecology. Both deterministic and stochastic factors play important roles in shaping community composition and structure, but the ...
Jizhong Zhou, Wenzong Liu, Ye Deng, Yi-Huei Jiang, Kai Xue, Zhili He, Joy D. Van Nostrand, Liyou Wu, Yunfeng Yang, Aijie Wang   +9 more
doaj   +1 more source

Introducing Decorated HODs: modeling assembly bias in the galaxy-halo connection

, 2015
The connection between galaxies and dark matter halos is often inferred from data using probabilistic models, such as the Halo Occupation Distribution (HOD).
Bosch, Frank C. van den, Campbell, Duncan, Hearin, Andrew P., Tollerud, Erik, Zentner, Andrew R.   +4 more
core   +1 more source

Potential Driven Non-Reactive Phase Transitions of Ordered Porphyrin Molecules on Iodine-Modified Au(100): An Electrochemical Scanning Tunneling Microscopy (EC-STM) Study [PDF]

, 2018
The modelling of long-range ordered nanostructures is still a major issue for the scientific community. In this work, the self-assembly of redox-active tetra(N-methyl-4-pyridyl)-porphyrin cations (H2TMPyP) on an iodine-modified Au(100) electrode surface ...
Blanco, Mat\uedas, Granozzi, Gaetano, Kosmala, Tomasz, Wandelt, Klaus   +3 more
core   +1 more source

Contrasting ecological processes shape the Eucalyptus phyllosphere bacterial and fungal community assemblies

Journal of Sustainable Agriculture and Environment, 2022
Introduction Phyllosphere microbiome is intrinsically linked to plant performance and ecosystem functioning. However, our knowledge about the role of ecological processes in shaping the biogeography of different phyllosphere microbial communities is ...
Zhen‐Zhen Yan, Qing‐Lin Chen, Chao‐Yu Li, Bao‐Anh Thi Nguyen, Ji‐Zheng He, Hang‐Wei Hu   +5 more
doaj   +1 more source

The role of intraspecific trait variability and soil properties in community assembly during forest secondary succession

Ecosphere, 2019
Trait‐based approaches applied to community assembly have led to a considerable advance in understanding the drivers that underlie community dynamics.
Yongfu Chai, Han Dang, Ming Yue, Jinshi Xu, Lixia Zhang, Jiaxin Quan, Yaoxin Guo, Ting Li, Lei Wang, Mao Wang, Xiao Liu   +10 more
doaj   +1 more source