Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform [PDF]
Plant Methods, 2010 Background Complete chloroplast genome sequences provide a valuable source of molecular markers for studies in molecular ecology and evolution of plants.
Shepherd Lara D +5 more
doaj +5 more sources
Complete Nucleotide Sequence of the Chloroplast Genome from the Tasmanian Blue Gum, Eucalyptus globulus (Myrtaceae) [PDF]
, 2005 The complete nucleotide sequence of the chloroplast genome of the hardwood species Eucalyptus globulus is presented and compared with chloroplast genomes of tree and non-tree angiosperms and two softwood tree species.
Dorothy A. Steane
openalex +5 more sources
Finding the Core-Genes of Chloroplasts [PDF]
Journal of Bioscience, Biochemistry, and Bioinformatics,
4(5):357--364, 2014, 2014 Due to the recent evolution of sequencing techniques, the number of available genomes is rising steadily, leading to the possibility to make large scale genomic comparison between sets of close species. An interesting question to answer is: what is the common functionality genes of a collection of species, or conversely, to determine what is specific ...
AlKindy, Bassam +5 more
arxiv +5 more sources
Complete chloroplast genome of Macadamia integrifoliaconfirms the position of the Gondwanan early-diverging eudicot family Proteaceae [PDF]
, 2014 BACKGROUND: Sequence data from the chloroplast genome have played a central role in elucidating the evolutionary history of flowering plants, Angiospermae.
Catherine J. Nock +2 more
openalex +5 more sources
Correction: The Complete Sequence of the Acacia ligulata Chloroplast Genome Reveals a Highly Divergent clpP1 Gene [PDF]
, 2015 Legumes are a highly diverse angiosperm family that include many agriculturally important species. To date, 21 complete chloroplast genomes have been sequenced from legume crops confined to the Papilionoideae subfamily.
Anna V. Williams +4 more
openalex +9 more sources
Improved Core Genes Prediction for Constructing well-supported Phylogenetic Trees in large sets of Plant Species [PDF]
Springer LNBI 9043, 2015, 379--390, 2015 The way to infer well-supported phylogenetic trees that precisely reflect the evolutionary process is a challenging task that completely depends on the way the related core genes have been found. In previous computational biology studies, many similarity based algorithms, mainly dependent on calculating sequence alignment matrices, have been proposed ...
B. Alkindy +9 more
arxiv +3 more sources
The complete chloroplast genome of Sisymbrium irio [PDF]
Mitochondrial DNA. Part B. Resources, 2018 The complete chloroplast genome of Sisymbrium irio was determined. The length of the complete chloroplast genome is 154,001 bp. The whole chloroplast genome consists of 83,891 bp long single copy (LSC) and 17,630 bp small single copy (SSC) regions ...
Takahiro Kawanabe +4 more
doaj +4 more sources
Complete Chloroplast Genome Sequence of Omani Lime (Citrus aurantiifolia) and Comparative Analysis within the Rosids [PDF]
, 2014 The genus Citrus contains many economically important fruits that are grown worldwide for their high nutritional and medicinal value. Due to frequent hybridizations among species and cultivars, the exact number of natural species and the taxonomic ...
Al-Sadi, Abdullah M. +3 more
core +16 more sources
The complete chloroplast genome of Viola philippica [PDF]
Mitochondrial DNA Part B, 2021 The complete chloroplast genome of Viola philippica was sequenced, assembled, and annotated. It is a circular form of 156,469 bp in length, which was separated into four distinct regions, a large single-copy (LSC) of 85,668 bp, a small single-copy region (SSC) of 18,001 bp, and two inverted repeats (IR) of 26,400 bp.
Yupeng Guo, Pengcheng Lin, Min Wang
openaire +4 more sources
The complete chloroplast genome of Androsace mariae [PDF]
Mitochondrial DNA Part B, 2021 The complete chloroplast genome of Androsace mariae was sequenced and assembled. It is a circular form genome of 151,958 bp in length, which was separated into four distinct regions, a large single-copy (LSC) of 83,292 bp, a small single-copy region (SSC) of 16,744 bp, two inverted repeats (IR) of 25,961 bp.
Yupeng Guo +7 more
openaire +4 more sources