Results 231 to 240 of about 558,921 (264)
Core-genome-mediated promising alternative drug and multi-epitope vaccine targets prioritization against infectious Clostridium difficile. [PDF]
PLoS OneAiman S +8 more
europepmc +1 more source
Core and Accessory Genome Analysis of Vibrio mimicus [PDF]
Microorganisms, 2021 Vibrio mimicus is an emerging pathogen, mainly associated with contaminated seafood consumption. However, little is known about its evolution, biodiversity, and pathogenic potential. This study analyzes the pan-, core, and accessory genomes of nine V. mimicus strains.
Fernando González-Candelas +2 more
exaly +6 more sources
Some of the next articles are maybe not open access.
Related searches:
Related searches:
Inferring Core Genome Phylogenies for Bacteria
2021Due to the increasing availability of public bacterial genome data and cost efficiency of novel bacterial strain sequencing, phylogenetic analyses based on more than a single or few marker genes have become feasible. In this method protocol, we describe the complete bioinformatic workflow from raw genomic data to final phylogenetic analyses based on ...
Alexander, Keller, Markus J, Ankenbrand
openaire +2 more sources
The Core and Pan-Genome of the Vibrionaceae
2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing, 2009Species of the family Vibrionaceae are ubiquitous in marine environments and the family contains numerous important pathogens of humans and marine species. In order to find the core, accessory and pan-proteome of this family, we deduced the complete set of orthologs for eleven strains from this family.
Timothy G. Lilburn +2 more
openaire +1 more source
Comparative bacterial genomics: defining the minimal core genome
Antonie van Leeuwenhoek, 2012A comparative genomics analysis revealed 702 genes present in the bacterial Gram-negative core gene set (92 species analyzed) and 959 genes in the Gram-positive core gene set (93 species analyzed). Mycoplasma genitalium, which has the smallest known genome (517 genes) of a non-symbiont, was used in a three-way reciprocal analysis with the Gram-negative
C H, Huang, T, Hsiang, J T, Trevors
openaire +2 more sources
Managing core resources for genomics and proteomics
Pharmacogenomics, 2003Recent years have seen an explosive growth in biological data, which is often not published in a conventional sense but rather deposited in a database. This trend and the need for computational analyses of the data make databases essential tools for biological research.
Rolf, Apweiler +3 more
openaire +2 more sources
Genome Evolution in Malaria Parasites: I. Core Genome Components
2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing, 2009Malaria is one of the most common infectious diseases that affect millions of people globally. It is caused by protozoan parasites in the genus Plasmodium. Existing antimalarials have lost efficacy thanks to the emergence of resistant parasite populations and the incidence of the disease is on the rise.
Hong Cai, Yufeng Wang 0002, Jianying Gu
openaire +1 more source
Insect genome content phylogeny and functional annotation of core insect genomes
Molecular Phylogenetics and Evolution, 2016Twenty-one fully sequenced and well annotated insect genomes were examined for genome content in a phylogenetic context. Gene presence/absence matrices and phylogenetic trees were constructed using several phylogenetic criteria. The role of e-value on phylogenetic analysis and genome content characterization is examined using scaled e-value cutoffs and
Jeffrey A, Rosenfeld +2 more
openaire +2 more sources
Genomic Sequencing (Core Article)
2006Beginning with the landmark work of Watson and Crick and continuing with the technological breakthroughs of the 1970s, 1980s, and the 1990s, molecular genetics and genomics has revolutionized all aspects of biology. Today, scientists are able to decipher the precise order of every nucleotide of an organism's complete genome, using a conceptually simple
Todd Charles Wood, Jeffrey P. Tomkins
openaire +1 more source
The Sorghum Genome Sequence: A Core Resource for Saccharinae Genomics
2012As a taxon noted for large and complex polyploid genomes, a facile genomic model is of especially great importance to the Saccharinae. The genome of Sorghum bicolor (sorghum) offers numerous advantages as such a model, with a physical size (about 730 mbp) that is only moderately larger than that of rice, and enjoying the same low level of gene ...
openaire +1 more source