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Chloroplast genome assembly, annotation, comparative genomics, and genetic diversity analysis of a vulnerable endemic species Lavandula maroccana Murb. [PDF]
PLoS OneKumar Biswas M +6 more
europepmc +1 more source
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RFLP analysis of cpDNA in the genus Hypericum
Biologia (Bratislava), 2010The chloroplast DNA of 43 species including 16 sections from the genus Hypericum was studied by PCR-RFLP analysis. The PCR-amplified products of four cpDNA regions, trnC-trnD, psbC-trnS, trnL-trnF and rbcL were digested with four restriction endonucleases.
Hazler Pilepić, Kroata +4 more
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DetectingOrobanche species by using cpDNA diagnostic markers
Phytoparasitica, 2007Some species of the genusOrobanche are among the most devastating parasitic weeds, causing extensive damage in agricultural fields. Considering the difficult control due to seed longevity in the soil, small seed size, high fecundity and a subterranean phase that allows them to parasitize the host before they emerge and become evident, the development ...
B. Román +5 more
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Phylogeny of Rutaceae based on twononcoding regions from cpDNA
American Journal of Botany, 2008Primarily known only by the edible fruits of Citrus, Rutaceae comprise a large (c. 160 genera and 1900 species), morphologically diverse, cosmopolitan family. Of its extraordinary array of secondary chemical compounds, many have medicinal, antimicrobial, insecticidal, or herbicidal properties.
Milton, Groppo +4 more
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cpDNA and mtDNA Primers in Plants
1998Because they are haploid and evolve clonally, chloroplast DNA (cpDNA) and plant mitochondrial DNA (mtDNA) are a source of original markers that are very useful for studies of phylogeny and population genetics. Both are large molecules but they evolve very differently.
Petit, R.J. +2 more
exaly +3 more sources
PCR-RFLP analysis of cpDNA in the genus Abies
Theoretical and Applied Genetics, 1999We used PCR-RFLP analysis of the chloroplast DNA of the genus Abies (family Pinaceae), to determine if the method could be employed to detect inter-specific variation in this genus and to study how the variation was distributed in different regions of the genome.
Parducci Laura, Szmidt Alfred E
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Phylogeography of the genus Cardiandra based on genetic variation in cpDNA sequences
Journal of Plant Research, 2006We investigated the phylogenetic relationships within the genus Cardiandra based on plastid DNA sequences. The phylogenetic tree showed that Cardiandra populations from the Ryukyu Islands (Japan) and Taiwan were monophyletic (Ryukyu-Taiwan clade), whereas taxa from China and mainland Japan were sisters to this clade.
Hiroaki, Setoguchi +6 more
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Postglacial recolonization and cpDNA variation of silver birch, Betula pendula
Molecular Ecology, 2002AbstractChloroplast PCR‐RFLP markers were used to reconstruct the history of the silver birch, Betula pendula Roth, in Europe since the last glacial maximum (LGM). In birch, fossil pollen maps do not reveal a clear chronological sequence of postglacial spread.
Palmé, Anna +4 more
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Complete genome sequence of chloroplast DNA (cpDNA) of Chlorella sorokiniana
Mitochondrial DNA Part A, 2014The complete chloroplast genome sequence of Chlorella sorokiniana strain (SAG 111-8 k) is presented in this study. The genome consists of circular chromosomes of 109,811 bp, which encode a total of 109 genes, including 74 proteins, 3 rRNAs and 31 tRNAs. Moreover, introns are not detected and all genes are present in single copy. The overall AT contents
Orsini M +6 more
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