Results 21 to 30 of about 12,984 (193)

Mutations in the Caenorhabditis elegans U2AF large subunit UAF-1 alter the choice of a 3' splice site in vivo. [PDF]

open access: yesPLoS Genetics, 2009
The removal of introns from eukaryotic RNA transcripts requires the activities of five multi-component ribonucleoprotein complexes and numerous associated proteins.
Long Ma, H Robert Horvitz
doaj   +1 more source

Comparison of In Silico Tools for Splice-Altering Variant Prediction Using Established Spliceogenic Variants: An End-User’s Point of View

open access: yesInternational Journal of Genomics, 2022
Assessing the impact of variants of unknown significance on splicing has become a critical issue and a bottleneck, especially with the widespread implementation of whole-genome or exome sequencing.
Woori Jang   +3 more
doaj   +1 more source

Functional characterization of the spf/ash splicing variation in OTC deficiency of mice and man. [PDF]

open access: yesPLoS ONE, 2015
The spf/ash mouse model of ornithine transcarbamylase (OTC) deficiency, a severe urea cycle disorder, is caused by a mutation (c.386G>A; p.R129H) in the last nucleotide of exon 4 of the Otc gene, affecting the 5' splice site and resulting in partial use ...
Ana Rivera-Barahona   +8 more
doaj   +1 more source

An unclassified variant of CHD7 activates a cryptic splice site in a patient with CHARGE syndrome. [PDF]

open access: yesHum Genome Var, 2018
CHARGE syndrome is a rare autosomal dominant disease that is typically caused by heterozygous CHD7 mutations. A de novo variant in a CHD7 splicing acceptor site (NM_017780.3:c.7165-4A>G) was identified in a Japanese boy with CHARGE syndrome. This variant has been considered to be an "unclassified variant" due to its position outside the consensus ...
Katoh-Fukui Y   +10 more
europepmc   +4 more sources

A genetic screen in C. elegans reveals roles for KIN17 and PRCC in maintaining 5' splice site identity.

open access: yesPLoS Genetics, 2022
Pre-mRNA splicing is an essential step of eukaryotic gene expression carried out by a series of dynamic macromolecular protein/RNA complexes, known collectively and individually as the spliceosome.
Jessie M N G L Suzuki   +5 more
doaj   +1 more source

Intrinsic differences between authentic and cryptic 5' splice sites [PDF]

open access: yesNucleic Acids Research, 2003
Cryptic splice sites are used only when use of a natural splice site is disrupted by mutation. To determine the features that distinguish authentic from cryptic 5' splice sites (5'ss), we systematically analyzed a set of 76 cryptic 5'ss derived from 46 human genes.
Krainer, Adrian R.   +2 more
openaire   +3 more sources

Induction of cryptic pre-mRNA splice-switching by antisense oligonucleotides

open access: yesScientific Reports, 2021
Antisense oligomers (AOs) are increasingly being used to modulate RNA splicing in live cells, both for research and for the development of therapeutics.
Kristin A. Ham   +7 more
doaj   +1 more source

Clinical impact of splicing in neurodevelopmental disorders

open access: yesGenome Medicine, 2020
Clinical exome sequencing is frequently used to identify gene-disrupting variants in individuals with neurodevelopmental disorders. While splice-disrupting variants are known to contribute to these disorders, clinical interpretation of cryptic splice ...
Stephan J. Sanders   +2 more
doaj   +1 more source

A splice site mutation in hERG leads to cryptic splicing in human long QT syndrome [PDF]

open access: yesJournal of Molecular and Cellular Cardiology, 2008
Mutations in the human ether-a-go-go-related gene (hERG) cause type 2 long QT syndrome. In this study, we investigated the pathogenic mechanism of the hERG splice site mutation 2398+1G>C and the genotype-phenotype relationship of mutation carriers in three unrelated kindreds with long QT syndrome. The effect of 2398+1G>C on mRNA splicing was studied by
Qiuming, Gong   +8 more
openaire   +2 more sources

U7 snRNA-mediated correction of aberrant splicing caused by activation of cryptic splice sites [PDF]

open access: yesJournal of Human Genetics, 2007
A considerable fraction of mutations associated with hereditary disorders and cancers affect splicing. Some of them cause exon skipping or the inclusion of an additional exon, whereas others lead to the inclusion of intronic sequences or deletion of exonic sequences through the activation of cryptic splice sites. We focused on the latter cases and have
Hideki, Uchikawa   +6 more
openaire   +2 more sources

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