Firebird Database Backup by Serialized Database Table Dump [PDF]
Ling, Maurice HT. 2007. Firebird Database Backup by Serialized
Database Table Dump. The Python Papers 2 (1): 10-14, 2007 This paper presents a simple data dump and load utility for Firebird databases which mimics mysqldump in MySQL. This utility, fb_dump and fb_load, for dumping and loading respectively, retrieves each database table using kinterbasdb and serializes the data using marshal module.
Ling, Maurice HT
arxiv +4 more sources
MisPred: a resource for identification of erroneous protein sequences in public databases [PDF]
, 2013 Correct prediction of the structure of protein-coding genes of higher eukaryotes is still a difficult task; therefore, public databases are heavily contaminated with mispredicted sequences.
Nagy, Alinda, Patthy, László
core +1 more source
decodeRNA-predicting non-coding RNA functions using guilt-by-association [PDF]
, 2017 Although the long non-coding RNA (lncRNA) landscape is expanding rapidly, only a small number of lncRNAs have been functionally annotated. Here, we present decodeRNA (http://www.decoderna.org), a database providing functional contexts for both human ...
Anckaert, Jasper +5 more
core +2 more sources
Belnap-Dunn logic and query answering in inconsistent databases with null values [PDF]
Scientific Annals of Computer Science vol. 33(2):159-192 (2023), 2023 This paper concerns an expansion of first-order Belnap-Dunn logic, named $\mathrm{BD}^{\supset,\mathsf{F}}$, and an application of this logic in the area of relational database theory. The notion of a relational database, the notion of a query applicable to a relational database, and several notions of an answer to a query with respect to a relational ...
arxiv +1 more source
ppiTrim: Constructing non-redundant and up-to-date interactomes [PDF]
, 2011 Robust advances in interactome analysis demand comprehensive, non-redundant and consistently annotated datasets. By non-redundant, we mean that the accounting of evidence for every interaction should be faithful: each independent experimental support is ...
Stojmirović, Aleksandar, Yu, Yi-Kuo
core +3 more sources
RegenBase: a knowledge base of spinal cord injury biology for translational research. [PDF]
, 2016 Spinal cord injury (SCI) research is a data-rich field that aims to identify the biological mechanisms resulting in loss of function and mobility after SCI, as well as develop therapies that promote recovery after injury.
Abeyruwan, Saminda W +9 more
core +2 more sources
Ewé: a web-based ethnobotanical database for storing and analysing data [PDF]
, 2020 Ethnobotanical databases serve as repositories of traditional knowledge (TK), either at international or local scales. By documenting plant species with traditional use, and most importantly, the applications and modes of use of such species ...
Hawkins, Julie A. +1 more
core +1 more source
Benchmarking database systems for Genomic Selection implementation [PDF]
, 2019 Motivation: With high-throughput genotyping systems now available, it has become feasible to fully integrate genotyping information into breeding programs.
Guignon, Valentin +10 more
core +2 more sources
Searching a biomedical database from Bulgaria : the ABS database [PDF]
, 2007 The University of Sofia, Bulgaria, disseminates local biomedical literature (1994 to present) through a free online database, ABS. We systematically searched ABS to identify citations to controlled trials and find what proportion of these studies are to
Abhijnhan, A. +3 more
core +2 more sources
Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi [PDF]
, 2014 DNA phylogenetic comparisons have shown that morphology-based species recognition often underestimates fungal diversity. Therefore, the need for accurate DNA sequence data, tied to both correct taxonomic names and clearly annotated specimen data, has ...
Abarenkov, K +100 more
core +2 more sources