Results 181 to 190 of about 334,258 (285)

De novo assembly and annotation of the singing mouse genome. [PDF]

BMC Genomics, 2023
Smith SK, Frazel PW, Khodadadi-Jamayran A, Zappile P, Marier C, Okhovat M, Brown S, Long MA, Heguy A, Phelps SM.   +9 more
europepmc   +1 more source

Enabling the study of gene function in gymnosperms: Virus‐induced gene silencing in Ephedra tweedieana

Applications in Plant Sciences, EarlyView.
Abstract Premise As the sister clade to angiosperms, extant gymnosperms are crucial for reconstructing ancestral gene regulatory networks in seed plants. This highlights the need for model systems representing each of their distinct lineages. However, tools to quickly and effectively investigate gene function in gymnosperms are still limited due to the
Anthony G. K. Garcia, Jo Trang Bùi, Todd P. Michael, Stefanie M. Ickert‐Bond, Verónica S. Di Stilio   +4 more
wiley   +1 more source

Hybridization capture long-read sequencing and de novo assembly of homologous haplotypes: a comprehensive hemophilia test. [PDF]

Blood Adv
Liu B, Xu R, Ma S, Gu M, Kong L, Zhou L, Liu H, Chen S, Yang Y, Yu Z, Liang B, Jiang M.   +11 more
europepmc   +1 more source

A cost‐effective DNA extraction protocol for long‐read sequencing in non‐model plants

Applications in Plant Sciences, EarlyView.
Abstract Premise Third‐generation sequencing has revolutionized genomics, enabling in‐depth analysis of genome sequence, structure, and epigenetic features. Yet, extracting high‐quality DNA for long‐read sequencing remains a bottleneck—particularly in non‐model plants, such as mature trees growing in natural environments, which often contain abundant ...
Sofia Gaischuk, Cintia F. Marchetti, Ezequiel Petrillo, Fernando A. Rabanal, Detlef Weigel, Nicolás Bellora, M. Verónica Arana   +6 more
wiley   +1 more source

De novo assembly and comparative analysis of the mitochondrial genome of Reynoutria japonica. [PDF]

Front Genet, 2023
Chen J, Ma H, Fan H, Lin F, Chai T, Wang H.   +5 more
europepmc   +1 more source

Twist Engineering of Hybrid 2D van der Waals‐Transition Metal Oxide Membranes

Advanced Physics Research, EarlyView.
The integration of transition metal oxide membranes with 2D van der Waals materials offers exciting opportunities to study new interfacial phenomena. These interactions can create complex moiré patterns that change the materials' properties. Understanding these interactions, influenced by symmetry and distortion, poses significant challenges and ...
Mar Garcia Hernandez, Peter Bøggild, Mads Brandbyge, Jacobo Santamaria, Nini Pryds   +4 more
wiley   +1 more source

Resequencing and De Novo Assembly of Leishmania (Viannia) guyanensis from Amazon Region: Genome Assessment, Phylogenetic Insights and Therapeutic Targets. [PDF]

Pathogens
Costa LGA, Sousa Junior EC, Cardoso CC, Igreja MAFD, Acosta FS, Silva FRD, Garcez LM.   +6 more
europepmc   +1 more source

Self-indexing for de novo assembly

, 2017
For at least three decades computer science approaches have proved to be of utmost importance for extrapolating knowledge from biological data. Indeed, the amount of data produced by sequencing technologies has increased more than exponentially, outpacing Moore's law and making automatic analysis the only viable option.
openaire   +1 more source

The Role of miRNAs in Chicken Immune Regulation and Prospects for Disease‐Resistant Breeding

Animal Research and One Health, EarlyView.
A schematic workflow illustrating the screening of disease‐resistant miRNAs and the generation of miRNA‐based disease‐resistant chickens via PGC‐mediated germline genome editing. ABSTRACT MicroRNAs (miRNAs) are emerging as pivotal regulators of the immune system, playing a decisive role in shaping disease resistance in chicken.
Qiangzhou Wang, Weiran Wu, Qingqing Cai, Jiaxing Wang, Qi Gao, Muhammad Iftikhar, Yulin Bi, Hao Bai, Lihong Gu, Guobin Chang, Shihao Chen   +10 more
wiley   +1 more source

A de novo assembly based fusion gene detection concept based on DNA-seq data of 100 Ewing sarcoma cases. [PDF]

Brief Bioinform
Zhao X, Hotfilder M, Korsching E.
europepmc   +1 more source