Results 41 to 50 of about 9,790 (220)

Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20. [PDF]

, 2014
UnlabelledThe genomes of sulfate-reducing bacteria remain poorly characterized, largely due to a paucity of experimental data and genetic tools. To meet this challenge, we generated an archived library of 15,477 mapped transposon insertion mutants in the
Arkin, Adam P, Davis, Ronald W, Deutschbauer, Adam, Esquivel, Zuelma, Hazen, Terry C, Kazakov, Alexey E, Kuehl, Jennifer V, Kuehn, Raquel, Nguyen, Michelle, Price, Morgan N, Ray, Jayashree, Wetmore, Kelly M   +11 more
core   +2 more sources

Probing the Structure of [NiFeSe] Hydrogenase with QM/MM Computations [PDF]

, 2020
The geometry and vibrational behavior of selenocysteine [NiFeSe] hydrogenase isolated from Desulfovibrio vulgaris Hildenborough have been investigated using a hybrid quantum mechanical (QM)/ molecular mechanical (MM) approach. Structural models have been
Elghobashi-Meinhardt, Nadia Said, Moubarak, Samah, Mroginski, Maria Andrea, Tombolelli, Daria   +3 more
core   +1 more source

Sulfate Reducing Bacteria as Bio-cleaning Agents: Development of New Methodologies and Study Cases

Conservation Science in Cultural Heritage, 2017
In the last decades, the contribution of different scientific disciplines in the field of restoration and conservation of cultural heritage to finding alternative methods of investigation that are even more effective and fully respect artworks, operators
Annalisa Balloi, Emanuela Lombardi, Federica Troiano, Andrea Polo, Francesca Capitelli, Davide Gulotta, Lucia Toniolo, Anna Lucchini, Daniele Daffonchio   +8 more
doaj   +1 more source

Crystallization of Adenylylsulfate Reductase from Desulfovibrio gigas: A Strategy Based on Controlled Protein Oligomerization [PDF]

, 2011
Adenylylsulfate reductase (adenosine 5′-phosphosulfate reductase, APS reductase or APSR, E.C.1.8.99.2) catalyzes the conversion of APS to sulfite in dissimilatory sulfate reduction. APSR was isolated and purified directly from massive anaerobically grown
Chan, Sunney I., Chen, Chun-Jung, Chiang, Yuan-Lan, Chuankhayan, Phimonphan, Fang, Jou-Yin, Hsieh, Yin-Cheng, Huang, Yen-Chieh, Liu, Ming-Yih, Wang, Vincent C.-C., Yang, Ming-Chi   +9 more
core   +1 more source

The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20. [PDF]

, 2014
Sulfate-reducing bacteria play major roles in the global carbon and sulfur cycles, but it remains unclear how reducing sulfate yields energy. To determine the genetic basis of energy conservation, we measured the fitness of thousands of pooled mutants of
Arkin, Adam P, Bauer, Stefan, Deutschbauer, Adam M, Kuehl, Jennifer V, Price, Morgan N, Ray, Jayashree, Wetmore, Kelly M   +6 more
core   +1 more source

Phylogenetic analysis reveals an ancient gene duplication as the origin of the MdtABC efflux pump. [PDF]

, 2020
The efflux pumps from the Resistance-Nodulation-Division family, RND, are main contributors to intrinsic antibiotic resistance in Gram-negative bacteria. Among this family, the MdtABC pump is unusual by having two inner membrane components.
Górecki, Kamil, McEvoy, Megan M
core   +2 more sources

Functional responses of methanogenic archaea to syntrophic growth. [PDF]

, 2012
Methanococcus maripaludis grown syntrophically with Desulfovibrio vulgaris was compared with M. maripaludis monocultures grown under hydrogen limitation using transcriptional, proteomic and metabolite analyses.
Arkin, Adam P, Baidoo, Edward E, He, Zhili, Hendrickson, Erik L, Joachimiak, Marcin P, Keasling, Jay D, Leigh, John A, Mukhopadhyay, Aindrila, Rajeev, Lara, Redding-Johanson, Alyssa M, Stahl, David A, Stolyar, Sergey, Walker, Christopher B, Zhou, Jizhong   +13 more
core   +2 more sources

The Carbon Monoxide Dehydrogenase from Desulfovibrio vulgaris

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2015
Ni-containing Carbon Monoxide Dehydrogenases (CODHs) catalyze the reversible conversion between CO and CO₂and are involved in energy conservation and carbon fixation. These homodimeric enzymes house two NiFeS active sites (C-clusters) and three accessory [4Fe-4S] clusters.
Hadj-Saïd, Jessica, Pandelia, Maria-Eirini, Léger, Christophe, Fourmond, Vincent, Dementin, Sébastien   +4 more
openaire   +3 more sources

Genetic basis for nitrate resistance in Desulfovibrio strains

Frontiers in Microbiology, 2014
Nitrate is an inhibitor of sulfate-reducing bacteria (SRB). In petroleum production sites, amendments of nitrate and nitrite are used to prevent SRB production of sulfide that causes souring of oil wells.
Hannah eKorte, Hannah eKorte, Samuel R Fels, Samuel R Fels, Geoffrey A Christensen, Geoffrey A Christensen, Morgan N Price, Morgan N Price, Jennifer V Kuehl, Jennifer V Kuehl, Grant M Zane, Grant M Zane, Adam M Deutschbauer, Adam M Deutschbauer, Adam P Arkin, Adam P Arkin, Adam P Arkin, Judy D Wall, Judy D Wall, Judy D Wall   +19 more
doaj   +1 more source

Intestinal Alkaline Phosphatase Prevents Sulfate Reducing Bacteria-Induced Increased Tight Junction Permeability by Inhibiting Snail Pathway

Frontiers in Cellular and Infection Microbiology, 2022
Tight junctions (TJs) are essential components of intestinal barrier integrity and protect the epithelium against passive paracellular flux and microbial translocation.
Sudha B. Singh, Cristina N. Coffman, Matthew G. Varga, Amanda Carroll-Portillo, Cody A. Braun, Henry C. Lin, Henry C. Lin   +6 more
doaj   +1 more source