Results 91 to 100 of about 3,086,920 (343)

Distance mean-regular graphs [PDF]

open access: yes, 2016
We introduce the concept of distance mean-regular graph, which can be seen as a generalization of both vertex-transitive and distance-regular graphs. Let G be a graph with vertex set V , diameter D, adjacency matrix A, and adjacency algebra A. Then, G is
Diego, Victor, Fiol Mora, Miquel Àngel
core   +1 more source

A light‐triggered Time‐Resolved X‐ray Solution Scattering (TR‐XSS) workflow with application to protein conformational dynamics

open access: yesFEBS Open Bio, EarlyView.
Time‐resolved X‐ray solution scattering captures how proteins change shape in real time under near‐native conditions. This article presents a practical workflow for light‐triggered TR‐XSS experiments, from data collection to structural refinement. Using a calcium‐transporting membrane protein as an example, the approach can be broadly applied to study ...
Fatemeh Sabzian‐Molaei   +3 more
wiley   +1 more source

An Odd Characterization of the Generalized Odd Graphs [PDF]

open access: yes
2010 Mathematics Subject Classification: 05E30, 05C50;distance-regular graphs;generalized odd graphs;odd-girth;spectra of graphs;spectral excess theorem;spectral ...
Dam, E.R. van, Haemers, W.H.
core   +2 more sources

Analysing the significance of small conformational changes and low occupancy states in serial crystallographic data

open access: yesFEBS Open Bio, EarlyView.
This protocol paper outlines methods to establish the success of a time‐resolved serial crystallographic experiment, by means of statistical analysis of timepoint data in reciprocal space and models in real space. We show how to amplify the signal from excited states to visualise structural changes in successful experiments.
Jake Hill   +4 more
wiley   +1 more source

Graphs, friends and acquaintances

open access: yesElectronic Journal of Graph Theory and Applications, 2018
A graph is a mathematical object modeling the existence of a certain relation between pairs of elements of a given set. Many of the first results concerning graphs made reference to relationships between groups of people.
Cristina Dalfo, Miquel Àngel Fiol
doaj   +1 more source

Shortest Paths in Distance-regular Graphs

open access: yesEuropean Journal of Combinatorics, 2000
zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Enrique Bendito   +2 more
openaire   +2 more sources

Refinement of amino‐acid conformation vs. difference density maps in time‐resolved serial femtosecond crystallography data analysis

open access: yesFEBS Open Bio, EarlyView.
The dFoCC pipeline starts with observed DED and resting‐state coordinates, which are then used to generate a library of triggered states. Correlation analysis of the calculated DED features of each candidate vs observed DED permits quantitative evaluation of candidate structural quality.
Meng Iao Fong   +3 more
wiley   +1 more source

Perfect state transfer on distance-regular graphs and association schemes [PDF]

open access: yes, 2014
We consider the representation of a continuous-time quantum walk in a graph X by the matrix exp ⁡ ( − i t A ( X ) ) . We provide necessary and sufficient criteria for distance-regular graphs and, more generally, for graphs in association schemes to have ...
Gabriel Coutinho   +3 more
semanticscholar   +1 more source

MagmaFlow: A desktop platform for artificial intelligence‐driven expression analysis

open access: yesFEBS Open Bio, EarlyView.
MagmaFlow is a free, no‐code platform for gene expression analysis. It generates interactive volcano plots, links genes to literature, pathways, and diseases, prioritizes candidates using millions of publications, identifies affected biological processes, builds network diagrams, and exports publication‐ready figures and reports for macOS and Windows ...
Carlos E. Buss   +7 more
wiley   +1 more source

Importin 7 mediates the nuclear import of HIV‐1 integrase via a specific interacting interface

open access: yesFEBS Open Bio, EarlyView.
HIV‐1 integrase enables viral DNA integration into the host genome. By binding to the core domain of the host protein Importin 7 via its C‐terminal domain, the integrase is transported across the nuclear membrane into the nucleus, where integration of the viral genome into host DNA takes place. This translocation is a critical step for subsequent viral
Juana Bana   +5 more
wiley   +1 more source

Home - About - Disclaimer - Privacy