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New DNA Codes from Cyclic Codes over Mixed Alphabets
Let R=F4+uF4,withu2=u and S=F4+uF4+vF4,withu2=u,v2=v,uv=vu=0. In this paper, we study F4RS-cyclic codes of block length (α,β,γ) and construct cyclic DNA codes from them. F4RS-cyclic codes can be viewed as S[x]-submodules of Fq[x]〈xα−1〉×R[x]〈xβ−1〉×S[x]〈xγ−
Hai Q. Dinh +3 more
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Trade-offs in model compression for sequencing data-carrying DNA [PDF]
DNA is a leading candidate as the next archival storage media due to its density, durability and sustainability. To read (and write) data DNA storage exploits technology that has been developed over decades to sequence naturally occurring DNA in the life
Jasmine Quah, Omer Sella, Thomas Heinis
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Error characterization and error correction approaches in combinatorial DNA-based storage [PDF]
Data storage in DNA has recently emerged as a promising archival solution, offering space-efficient and long-lasting digital storage. DNA’s ultra-high density and durability make it an attractive medium for long-term data storage.
Inbal Preuss +5 more
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Linear constructions for DNA codes
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Philippe Gaborit, Oliver D KING
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DNA codes over finite local Frobenius non-chain rings of length 5 and nilpotency index 4
A one to one correspondence between the elements of a finite local Frobenius non-chain ring of length 5 and nilpotency index 4, and k-tuples of DNA codewords is established.
Castillo-Guillén C. A. +1 more
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The discovery of the structure of DNA transformed biology profoundly, catalysing the sequencing of the human genome and engendering a new view of biology as an information science. Two features of DNA structure account for much of its remarkable impact on science: its digital nature and its complementarity, whereby one strand of the helix binds ...
Leroy, Hood, David, Galas
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DNA Code Design Based on the Cosets of Codes over
DNA code design is a challenging problem, and it has received great attention in the literature due to its applications in DNA data storage, DNA origami, and DNA computing. The primary focus of this paper is in constructing new DNA codes using the cosets
Adel N. Alahmadi +2 more
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NOREC4DNA: using near-optimal rateless erasure codes for DNA storage
Background DNA is a promising storage medium for high-density long-term digital data storage. Since DNA synthesis and sequencing are still relatively expensive tasks, the coding methods used to store digital data in DNA should correct errors and avoid ...
Peter Michael Schwarz, Bernd Freisleben
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Bio-Constrained Codes with Neural Network for Density-Based DNA Data Storage
DNA has evolved as a cutting-edge medium for digital information storage due to its extremely high density and durable preservation to accommodate the data explosion. However, the strings of DNA are prone to errors during the hybridization process.
Abdur Rasool +3 more
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GCNSA: DNA storage encoding with a graph convolutional network and self-attention
Summary: DNA Encoding, as a key step in DNA storage, plays an important role in reading and writing accuracy and the storage error rate. However, currently, the encoding efficiency is not high enough and the encoding speed is not fast enough, which ...
Ben Cao, Bin Wang, Qiang Zhang
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