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A Generalized Minimal PBPK-PD Model of Bispecific Antibodies: Case Studies and Applications in Drug Development. [PDF]
Spinosa P +4 more
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Optimization of galectin-3 binding agents by in situ multiple compound synthesis and native mass spectrometry. [PDF]
Hoshi K +6 more
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Unlocking the potential of EphA2 with precision-guided cancer therapy: bicycle drug conjugates. [PDF]
Bennett G, Riedl J, Mudd G.
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Modality-DTA: Multimodality Fusion Strategy for Drug–Target Affinity Prediction
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2023Prediction of the drug-target affinity (DTA) plays an important role in drug discovery. Existing deep learning methods for DTA prediction typically leverage a single modality, namely simplified molecular input line entry specification (SMILES) or amino acid sequence to learn representations.
Xixi Yang +6 more
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Affinity-Based Methods in Drug-Target Discovery
Current Drug Targets, 2015Target discovery using the molecular approach, as opposed to the more traditional systems approach requires the study of the cellular or biological process underlying a condition or disease. The approaches that are employed by the "bench" scientist may be genetic, genomic or proteomic and each has its rightful place in the drug-target discovery process.
Gabriela, Rylova +7 more
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Multimodal contrastive representation learning for drug-target binding affinity prediction
Methods, 2023In the biomedical field, the efficacy of most drugs is demonstrated by their interactions with targets, meanwhile, accurate prediction of the strength of drug-target binding is extremely important for drug development efforts. Traditional bioassay-based drug-target binding affinity (DTA) prediction methods cannot meet the needs of drug R&D in the era ...
Linlin, Zhang +4 more
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A Mutual Attention Model for Drug Target Binding Affinity Prediction
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2022Vrious machine learning approaches have been developed for drug-target interaction (DTI) prediction. One class of these approaches, DTBA, is interested in Drug-Target Binding Affinity strength, rather than focusing merely on the presence or absence of interaction. Several machine learning methods have been developed for this purpose.
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NG-DTA: Drug-target affinity prediction with n-gram molecular graphs
2023 45th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), 2023Drug-target affinity (DTA) prediction is crucial to speed up drug development. The advance in deep learning allows accurate DTA prediction. However, most deep learning methods treat protein as a 1D string which is not informative to models compared to a graph representation. In this paper, we present a deep-learning-based DTA prediction method called N-
Lok-In, Tsui, Te-Cheng, Hsu, Che, Lin
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