Results 21 to 30 of about 1,037 (129)

The BioGenome Portal: a web-based platform for biodiversity genomics data management [PDF]

NAR Genomics and Bioinformatics
Roderic Guigo, Emilio Righi, Guigo Roderic   +2 more
exaly   +2 more sources

Genomes on a Tree (GoaT): A versatile, scalable search engine for genomic and sequencing project metadata across the eukaryotic tree of life [version 1; peer review: 2 approved]

Wellcome Open Research, 2023
  As genomic data transform our understanding of biodiversity, the Earth BioGenome Project (EBP) has set a goal of generating reference quality genome assemblies for all ~1.9 million described eukaryotic taxa.
Richard Challis, Cibele Sotero-Caio, Sujai Kumar, Max Brown, Mark Blaxter   +4 more
doaj   +1 more source

Characterising genome architectures using genome decomposition analysis

BMC Genomics, 2022
Genome architecture describes how genes and other features are arranged in genomes. These arrangements reflect the evolutionary pressures on genomes and underlie biological processes such as chromosomal segregation and the regulation of gene expression ...
Eerik Aunin, Matthew Berriman, Adam James Reid   +2 more
doaj   +1 more source

A sampling strategy for genome sequencing the British terrestrial arthropod fauna [version 1; peer review: 2 approved]

Wellcome Open Research, 2023
The Darwin Tree of Life (DToL) project aims to sequence and assemble high-quality genomes from all eukaryote species in Britain and Ireland, with the first phase of the project concentrating on family-level coverage plus species of particular ecological,
Craig R. Macadam, Ian Barnes, Heather Allen, Christopher Fletcher, Gavin R. Broad, Inez Januszczak, Peter W.H. Holland, Peter O. Mulhair, Owen T. Lewis, Benjamin W. Price, Lyndall Pereira da Conceicoa, Laura Sivess, Chris Raper, Liam Crowley, Olga Sivell, Mara Lawniczak, Douglas Boyes   +16 more
doaj   +1 more source

Galba: genome annotation with miniprot and AUGUSTUS

BMC Bioinformatics, 2023
Background The Earth Biogenome Project has rapidly increased the number of available eukaryotic genomes, but most released genomes continue to lack annotation of protein-coding genes.
Tomáš Brůna, Heng Li, Joseph Guhlin, Daniel Honsel, Steffen Herbold, Mario Stanke, Natalia Nenasheva, Matthis Ebel, Lars Gabriel, Katharina J. Hoff   +9 more
doaj   +1 more source

The Earth Biogenome Project

Biodiversity Information Science and Standards, 2019
The Earth BioGenome Project (EBP) is a recently proposed international collaborative research initiative that aims to sequence the genomes of all ~1.5 million known eukaryotic species on Earth in 10 years. The project has been called “biology’s moonshot” because of its potential to transform our understanding of life on Earth, to provide new tools for ...
Jonathan Coddington, Harris Lewin, Gene Robinson, W. John Kress   +3 more
openaire   +3 more sources

Indigenous peoples and local communities as partners in the sequencing of global eukaryotic biodiversity

npj Biodiversity, 2023
The aim to sequence, catalog, and characterize the genomes of all of Earth’s eukaryotic biodiversity is the shared mission of many ongoing large-scale biodiversity genomics initiatives.
Ann. M. Mc Cartney, M. A. Head, K. S. Tsosie, B. Sterner, J. R. Glass, S. Paez, J. Geary, M. Hudson   +7 more
doaj   +1 more source

The genome sequence of a cased caddisfly, Ceraclea dissimilis (Stephens, 1836) [version 2; peer review: 2 approved, 1 approved with reservations]

Wellcome Open Research
We present a genome assembly from an individual male Ceraclea dissimilis (cased caddisfly; Arthropoda; Insecta; Trichoptera; Leptoceridae). The genome sequence is 452.7 megabases in span.
Derek Coleman
doaj   +1 more source

The genome sequence of the common adder, Vipera berus (Linnaeus, 1758) [version 2; peer review: 2 approved, 1 approved with reservations]

Wellcome Open Research
We present a genome assembly from an individual female Vipera berus (common adder; Chordata; Lepidosauria; Squamata; Viperidae). The haplotype-resolved assembly contains two haplotypes with total lengths of 1,695.0 megabases and 1,476.7 megabases ...
John Benjamin (Ben) Owens, Stuart Graham, Wolfgang Wüster, John Mulley, Axel Barlow, Rhys Morgan   +5 more
doaj   +1 more source

The genome sequence of Tachina fera (Linnaeus, 1761), a tachinid fly [version 2; peer review: 2 approved, 1 approved with reservations]

Wellcome Open Research
We present a genome assembly from an individual female Tachina fera (Arthropoda; Insecta; Diptera; Tachinidae). The genome sequence is 752 megabases in span.
Will Nash
doaj   +1 more source