Estimating offsets for avian displacement effects of anthropogenic impacts [PDF]
Biodiversity offsetting, or compensatory mitigation, is increasingly being used in temperate grassland ecosystems to compensate for unavoidable environmental damage from anthropogenic developments such as transportation infrastructure, urbanization, and ...
Arnett E. B. +17 more
core +2 more sources
Pitfalls and Remedies for Cross Validation with Multi-trait Genomic Prediction Methods. [PDF]
Incorporating measurements on correlated traits into genomic prediction models can increase prediction accuracy and selection gain. However, multi-trait genomic prediction models are complex and prone to overfitting which may result in a loss of ...
Cheng, Hao, Runcie, Daniel
core +1 more source
Genomic breeding value estimation using nonparametric additive regression models [PDF]
Genomic selection refers to the use of genomewide dense markers for breeding value estimation and subsequently for selection. The main challenge of genomic breeding value estimation is the estimation of many effects from a limited number of observations. Bayesian methods have been proposed to successfully cope with these challenges.
Solberg Trygve +2 more
openaire +3 more sources
Application of Genomic Data for Reliability Improvement of Pig Breeding Value Estimates
Replacement pigs’ genomic prediction for reproduction (total number and born alive piglets in the first parity), meat, fatness and growth traits (muscle depth, days to 100 kg and backfat thickness over 6–7 rib) was tested using single-step genomic best ...
Ekaterina Melnikova +10 more
doaj +1 more source
EM algorithm for Bayesian estimation of genomic breeding values [PDF]
In genomic selection, a model for prediction of genome-wide breeding value (GBV) is constructed by estimating a large number of SNP effects that are included in a model. Two Bayesian methods based on MCMC algorithm, Bayesian shrinkage regression (BSR) method and stochastic search variable selection (SSVS) method, (which are called BayesA and BayesB ...
Iwata Hiroyoshi, Hayashi Takeshi
openaire +3 more sources
Assessment of Efficiency of Breeding Methods in Accelerating Genetic Gain in Rice
The pedigree, bulk, and single-seed descent-based rapid generation advance methods are commonly practiced breeding methods in rice. But the efficiency of these breeding methods in enhancing genetic gain has not been investigated yet.
Partha S. Biswas +8 more
doaj +1 more source
Genomic Prediction for 25 Agronomic and Quality Traits in Alfalfa (Medicago sativa)
Agronomic and quality traits in alfalfa are very important to forage industry. Genomic prediction (GP) based on genotyping-by-sequencing (GBS) data could shorten the breeding cycles and accelerate the genetic gains of these complex traits, if they ...
Congjun Jia +7 more
doaj +1 more source
Fish egg quality is strongly related with the ability of the egg to be fertilized and develop a normal embryo with good survival and a lack of abnormalities.
Álvaro Lorenzo-Felipe +6 more
doaj +1 more source
The effectiveness of genomic selection for milk production traits of Holstein dairy cattle [PDF]
Objective This study was conducted to test the efficiency of genomic selection for milk production traits in a Korean Holstein cattle population. Methods A total of 506,481 milk production records from 293,855 animals (2,090 heads with single nucleotide ...
Yun-Mi Lee +6 more
doaj +1 more source
Reliabilities of genomic estimated breeding values in Danish Jersey
In order to optimize the use of genomic selection in breeding plans, it is essential to have reliable estimates of the genomic breeding values. This study investigated reliabilities of direct genomic values (DGVs) in the Jersey population estimated by three different methods. The validation methods were (i) fivefold cross-validation and (ii) validation
Thomasen, J R +4 more
openaire +7 more sources

