Results 21 to 25 of about 46,371 (25)

Evolutionary accumulation modelling in AMR: machine learning to infer and predict evolutionary dynamics of multi-drug resistance [PDF]

arXiv
Can we understand and predict the evolutionary pathways by which bacteria acquire multi-drug resistance (MDR)? These questions have substantial potential impact in basic biology and in applied approaches to address the global health challenge of antimicrobial resistance (AMR).
arxiv  

Comparative Analysis of the Saccharomyces cerevisiae and Caenorhabditis elegans Protein Interaction Network [PDF]

BMC Evolutionary Biology 2005, 5:23, 2005
Protein interaction networks aim to summarize the complex interplay of proteins in an organism. Early studies suggested that the position of a protein in the network determines its evolutionary rate but there has been considerable disagreement as to what extent other factors, such as protein abundance, modify this reported dependence.
arxiv  

Ecosystem-Oriented Distributed Evolutionary Computing [PDF]

arXiv, 2012
We create a novel optimisation technique inspired by natural ecosystems, where the optimisation works at two levels: a first optimisation, migration of genes which are distributed in a peer-to-peer network, operating continuously in time; this process feeds a second optimisation based on evolutionary computing that operates locally on single peers and ...
arxiv  

Evolutionary dynamics with random payoff matrices [PDF]

arXiv
Uncertainty, characterised by randomness and stochasticity, is ubiquitous in applications of evolutionary game theory across various fields, including biology, economics and social sciences. The uncertainty may arise from various sources such as fluctuating environments, behavioural errors or incomplete information.
arxiv  

evoBPE: Evolutionary Protein Sequence Tokenization [PDF]

arXiv
Recent advancements in computational biology have drawn compelling parallels between protein sequences and linguistic structures, highlighting the need for sophisticated tokenization methods that capture the intricate evolutionary dynamics of protein sequences. Current subword tokenization techniques, primarily developed for natural language processing,
arxiv