Results 61 to 70 of about 1,136,141 (298)

Topological analysis of carbon flux during multi-stress adaptation in Halomonas sp. AAD12

open access: yesElectronic Journal of Biotechnology, 2015
Background: Osmolytes with their effective stabilizing properties are accumulated as protectants not only against salinity but also against denaturing harsh environmental stresses such as freezing, drying, high temperatures, oxygen radicals and radiation.
Hilal Mangaoglu Yoruk   +1 more
doaj   +1 more source

NetFlow: A tool for isolating carbon flows in genome-scale metabolic networks

open access: yesMetabolic Engineering Communications, 2021
1. Abstract: Genome-scale stoichiometric models (GSMs) have been widely utilized to predict and understand cellular metabolism. GSMs and the flux predictions resulting from them have proven indispensable to fields ranging from metabolic engineering to ...
Sean G. Mack, Ganesh Sriram
doaj   +1 more source

SBML Level 3 Package Proposal: Flux [PDF]

open access: yes, 2010
This document describes an easy to implement package for storing information related to flux balance analysis of SBML Level 3 models (the FBA package).
Brett G. Olivier, Frank Bergmann
core   +2 more sources

Metabolic analyses elucidate nontrivial gene targets for amplifying dihydroartemisinic acid production in yeast

open access: yesFrontiers in Microbiology, 2013
Synthetic biology enables metabolic engineering of industrial microbes to synthesize value-added molecules. In this, a major challenge is the efficient redirection of carbon to the desired metabolic pathways.
Ashish eMisra   +6 more
doaj   +1 more source

dfba: Software for efficient simulation of dynamic flux-balance analysis models in Python

open access: yesJournal of Open Source Software, 2020
Flux-balance analysis (FBA) is a computational method based on linear programming (LP) that has had enormous success modeling the metabolic behaviour of organisms and cellular systems existing in steady state with their environment (Orth, Thiele ...
David S. Tourigny   +2 more
semanticscholar   +1 more source

FASIMU: flexible software for flux-balance computation series in large metabolic networks

open access: yesBMC Bioinformatics, 2011
Background Flux-balance analysis based on linear optimization is widely used to compute metabolic fluxes in large metabolic networks and gains increasingly importance in network curation and structural analysis. Thus, a computational tool flexible enough
Gille Christoph   +4 more
doaj   +1 more source

Flux balance analysis of primary metabolism in Chlamydomonas reinhardtii [PDF]

open access: yesBMC Systems Biology, 2009
Photosynthetic organisms convert atmospheric carbon dioxide into numerous metabolites along the pathways to make new biomass. Aquatic photosynthetic organisms, which fix almost half of global inorganic carbon, have great potential: as a carbon dioxide fixation method, for the economical production of chemicals, or as a source for lipids and starch ...
Boyle, Nanette R, Morgan, John A
openaire   +4 more sources

Predictive Sulfur Metabolism - a field in flux

open access: yesFrontiers in Plant Science, 2014
The key role of sulfur metabolites in response to biotic and abiotic stress in plants, as well as their importance in diet and health has led to a significant interest and effort in trying to understand and manipulate the production of relevant compounds.
Alexander eCalderwood   +2 more
doaj   +1 more source

A systems level approach to study metabolic networks in prokaryotes with the aromatic amino acid biosynthesis pathway

open access: yesFrontiers in Genetics, 2023
Metabolism of an organism underlies its phenotype, which depends on many factors, such as the genetic makeup, habitat, and stresses to which it is exposed.
Priya V. K, Somdatta Sinha
doaj   +1 more source

First measurements of the flux integral with the NIST-4 watt balance

open access: yes, 2015
In early 2014, construction of a new watt balance, named NIST-4, has started at the National Institute of Standards and Technology (NIST). In a watt balance, the gravitational force of an unknown mass is compensated by an electromagnetic force produced ...
Cao, A.   +7 more
core   +1 more source

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