TreeGenes: A Forest Tree Genome Database
International Journal of Plant Genomics, 2008 The Dendrome Project and associated TreeGenes database serve the forest genetics research community through a curated and integrated web-based relational database. The research community is composed of approximately 2 000 members representing over 730 organizations worldwide.
Jill L. Wegrzyn +3 more
openaire +2 more sources
Forest ecosystem genomics and adaptation: EVOLTREE conference report [PDF]
Tree Genetics & Genomes, 2011 This article is a summary report of the international conference "Forest ecosystem genomics and adaptation" organized by the EVOLTREE Network of Excellence in San Lorenzo de El Escorial (Madrid), Spain, from 9 to 11 June 2010. Main achievements and results of the network are presented for the eight thematic sessions and a stakeholder session.
Kremer, Antoine +19 more
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De novo transcriptome sequencing and SSR markers development for Cedrela balansae C. DC., a native tree species of northwest Argentina [PDF]
, 2018 The endangered Cedrela balansae C.DC. (Meliaceae) is a high-value timber species with great potential for forest plantations that inhabits the tropical forests in Northwestern Argentina.
Acuña, Cintia Vanesa +11 more
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Computational and Bioinformatics Frameworks for Next-Generation Whole Exome and Genome Sequencing
The Scientific World Journal, 2013 It has become increasingly apparent that one of the major hurdles in the genomic age will be the bioinformatics challenges of next-generation sequencing. We provide an overview of a general framework of bioinformatics analysis.
Marisa P. Dolled-Filhart +4 more
doaj +1 more source
Epigenetic regulation of adaptive responses of forest tree species to the environment [PDF]
, 2013 Epigenetic variation is likely to contribute to the phenotypic plasticity and adaptative capacity of plant species, and may be especially important for long-lived organisms with complex life cycles, including forest trees.
Abarca, Dolores +16 more
core +4 more sources
Dissecting intratumoral myeloid cell plasticity by single cell RNA‐seq
Cancer Medicine, 2019 Tumor‐infiltrating myeloid cells are the most abundant leukocyte population within tumors. Molecular cues from the tumor microenvironment promote the differentiation of immature myeloid cells toward an immunosuppressive phenotype.
Qianqian Song +19 more
doaj +1 more source
scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
Nature Communications, 2021 Making sense of the rapidly growing single-cell omics datasets available is limited by difficulties in leveraging disparate datasets in analyses. Here, the authors present scGCN, a graph based convolutional network to allow effective knowledge transfer ...
Qianqian Song, Jing Su, Wei Zhang
doaj +1 more source
Genome-wide Association Study Identifies Genetic Determinants of Urine PCA3 Levels in Men
Neoplasia: An International Journal for Oncology Research, 2013 Prostate cancer gene 3 (PCA3) is a non-coding gene specifically overexpressed in prostate cancer (PCa) that has great potential as a clinical biomarker for predicting prostate biopsy outcome.
Zhuo Chen +9 more
doaj +1 more source
scLM: Automatic Detection of Consensus Gene Clusters Across Multiple Single-cell Datasets
Genomics, Proteomics & Bioinformatics, 2021 In gene expression profiling studies, including single-cell RNA sequencing (scRNA-seq) analyses, the identification and characterization of co-expressed genes provides critical information on cell identity and function.
Qianqian Song +3 more
doaj +1 more source
Genomics and synthetic biology as a viable option to intensify sustainable use of biodiversity [PDF]
, 2011 The Amazon basin is an area of mega-biodiversity. Different models have been proposed^1-8^ for the establishment of an effective conservation policy, increasing sustainability and adding value for biodiversity. Currently, a broad spectrum of technologies
Elibio L. Rech
core +3 more sources