AlphaFamImpute: high-accuracy imputation in full-sib families from genotype-by-sequencing data [PDF]
Bioinformatics, 2020 Abstract Summary AlphaFamImpute is an imputation package for calling, phasing and imputing genome-wide genotypes in outbred full-sib families from single nucleotide polymorphism (SNP) array and genotype-by-sequencing (GBS) data.
John Hickey +2 more
exaly +5 more sources
Breeding full-sib families of sugar cane using selection index [PDF]
Ciência Rural, 2014 An experiment with families belonging to the first selection stage (T1) of the Sugar Cane Breeding Program (PMGCA) of the Universidade Federal Rural do Rio de Janeiro (UFRRJ)/RIDESA was carried out in the Plant Disa, located in the municipality of ...
Livia Marcon Almeida +3 more
doaj +5 more sources
Selection among and within full-sib families of elephant grass for energy purposes [PDF]
Crop Breeding and Applied Biotechnology, 2018 Pennisetum purpureum Schum. has been a key alternative as an energy source in Brazil because of its higher dry matter accumulation and fiber content. This research aimed to select superior individuals of P.
Verônica Brito da Silva +7 more
doaj +6 more sources
Effects of common full-sib families on accuracy of genomic prediction for tagging weight in striped catfish Pangasianodon hypophthalmus [PDF]
Frontiers in Genetics, 2023 Common full-sib families (c2) make up a substantial proportion of total phenotypic variation in traits of commercial importance in aquaculture species and omission or inclusion of the c2 resulted in possible changes in genetic parameter estimates and re ...
Nguyen Thanh Vu +6 more
doaj +2 more sources
Markers associated with heading and aftermath heading in perennial ryegrass full-sib families. [PDF]
BMC Plant Biol, 2016 Heading and aftermath heading are important traits in perennial ryegrass because they impact forage quality. So far, genome-wide association analyses in this major forage species have only identified a small number of genetic variants associated with heading date that overall explained little of the variation. Some possible reasons include rare alleles
Arojju SK +6 more
europepmc +7 more sources
Analysis of Autozygosity Using Whole-Genome Sequence Data of Full-Sib Families in Pikeperch (Sander lucioperca) [PDF]
Frontiers in Genetics, 2022 Pikeperch (Sander lucioperca) has emerged as a high value species to the aquaculture industry. However, its farming techniques are at an early stage and its production is often performed without a selective breeding program, potentially leading to high ...
Lidia De los Ríos-Pérez +4 more
doaj +2 more sources
Early selection of full-sib potato families [PDF]
Ciencia E Agrotecnologia, 2011 Clonal selection is the preferred breeding method used in potatoes (Solanum tuberosum L.). However this selection procedure is only efficient for more advanced generations and shows no good results when applied in the seedling up to the second clonal generation.
Leandro Santos Peixouto +1 more
exaly +4 more sources
Linkage analysis between dominant and co-dominant makers in full-sib families of out-breeding species [PDF]
Genetics and Molecular Biology, 2010 As high-throughput genomic tools, such as the DNA microarray platform, have lead to the development of novel genotyping procedures, such as Diversity Arrays Technology (DArT) and Single Nucleotide Polymorphisms (SNPs), it is likely that, in the future ...
Alexandre Alonso Alves +3 more
doaj +2 more sources
Maximum likelihood mapping of quantitative trait loci using full-sib families. [PDF]
Genetics, 1992 Abstract A maximum likelihood method is presented for the detection of quantitative trait loci (QTL) using flanking markers in full-sib families. This method incorporates a random component for common family effects due to additional QTL or the environment. Simulated data have been used to investigate this method.
Sara Knott, Knott S A, Haley C S
exaly +3 more sources
Accurate Partition of Individuals Into Full-Sib Families From Genetic Data Without Parental Information [PDF]
Genetics, 2001 Abstract Two Markov chain Monte Carlo algorithms are proposed that allow the partitioning of individuals into full-sib groups using single-locus genetic marker data when no parental information is available. These algorithms present a method of moving through the sibship configuration space and locating the configuration that maximizes ...
B R, Smith, C M, Herbinger, H R, Merry
exaly +3 more sources