Results 101 to 110 of about 7,142,455 (272)
Gene ontology enrichment analysis of congenital diaphragmatic hernia-associated genes
Pediatric Research, 2018 Congenital diaphragmatic hernia (CDH) is a commonly occurring major congenital anomaly with a profound impact on neonatal mortality. The etiology of CDH is poorly understood and is complicated by multiple clinical presentations, reflecting the location ...
Timothy R. A. Dalmer, Robin D. Clugston
semanticscholar +1 more source
Ontology-assisted database integration to support natural language processing and biomedical data-mining [PDF]
, 2004 Successful biomedical data mining and information extraction require a complete picture of biological phenomena such as genes, biological processes, and diseases; as these exist on different levels of granularity.
Ceusters, Werner +4 more
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Mining functional gene modules by multi-view NMF of phenome-genome association
BMC GenomicsBackground Mining functional gene modules from genomic data is an important step to detect gene members of pathways or other relations such as protein-protein interactions.
Xu Jin +8 more
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Biomedical ontologies and their development, management, and applications in and beyond China
Journal of Bio-X Research, 2019 . Since the boom of biomedical big data studies, various big data processing technologies have been developed rapidly. As an important form of knowledge representation, ontology has become an important means for the utilization and integration of ...
Hongjie Pan +6 more
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The Gene Ontology and the Meaning of Biological Function.
Methods in molecular biology, 2017 The Gene Ontology (GO) provides a framework and set of concepts for describing the functions of gene products from all organisms. It is specifically designed for supporting the computational representation of biological systems.
P. Thomas
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The Plant Ontology: A common reference ontology for plants [PDF]
, 2010 The Plant Ontology (PO) (http://www.plantontology.org) (Jaiswal et al., 2005; Avraham et al., 2008) was designed to facilitate cross-database querying and to foster consistent use of plant-specific terminology in annotation.
Chris, Mungall +7 more
core
ProbCD: enrichment analysis accounting for categorization uncertainty [PDF]
, 2007 As in many other areas of science, systems biology makes extensive use of statistical association and significance estimates in contingency tables, a type of categorical data analysis known in this field as enrichment (also over-representation or ...
A Lewin +22 more
core +5 more sources
Scientific Reports, 2017 Gene Ontology (GO) enrichment analysis is ubiquitously used for interpreting high throughput molecular data and generating hypotheses about underlying biological phenomena of experiments.
Aurelie Tomczak +11 more
semanticscholar +1 more source
Using Ontology Fingerprints to evaluate genome-wide association study results [PDF]
, 2009 We describe an approach to characterize genes or phenotypes via ontology fingerprints which are composed of Gene Ontology (GO) terms overrepresented among those PubMed abstracts linked to the genes or phenotypes. We then quantify the biological relevance
Lam C. Tsoi +3 more
core +1 more source
Functional abstraction as a method to discover knowledge in gene ontologies.
PLoS ONE, 2014 Computational analyses of functions of gene sets obtained in microarray analyses or by topical database searches are increasingly important in biology. To understand their functions, the sets are usually mapped to Gene Ontology knowledge bases by means ...
Alfred Ultsch, Jörn Lötsch
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