Results 31 to 40 of about 363,946 (316)

Integrative analysis and expression profiling of secondary cell wall genes in C4 biofuel model Setaria italica reveals targets for lignocellulose bioengineering

Frontiers in Plant Science, 2015
Several underutilized grasses have excellent potential for use as bioenergy feedstock due to their lignocellulosic biomass. Genomic tools have enabled identification of lignocellulose biosynthesis genes in several sequenced plants.
Mehanathan eMuthamilarasan, Yusuf eKhan, Jananee eJaishankar, Shweta eShweta, CHARU eLATA, Manoj ePrasad   +5 more
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Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. [PDF]

, 2015
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.Plants exhibit an extraordinary range of genome sizes,
Novák, P, Pellicer, J., Fay, M. F., Leitch, IJ, Neumann, P., Peter D. Day, Leitch, A. R., Pellicer, J, Michael F. Fay, Petr Novák, Ilia J. Leitch, Day, PD, Kelly, L. J., Richard A. Nichols, Pavel Neumann, Lysak, M. A., Laura J. Kelly, Neumann, P, Jaume Pellicer, Nichols, RA, Andrew R. Leitch, Macas, J., Macas, J, Novak, P., Leitch, I. J., Lysak, M., Berger, M., Lysak, MA, Day, P. D., Martin A. Lysak, Renny-Byfield, S, Leitch, AR, Nichols, R. A., Jiří Macas, Simon Renny‐Byfield, Kelly, LJ, Berger, M, Fay, MF, Madeleine Berger, Renny-Byfield, S.   +39 more
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A prophage tail-like protein is deployed by Burkholderia bacteria to feed on fungi

Nature Communications, 2017
Some bacteria can feed on live fungi through unclear mechanisms. Here, the authors show that a T3SS-secreted protein, which is homologous to phage tail proteins, allows a Burkholderia gladioli strain to kill and feed on various fungal species.
Durga Madhab Swain, Sunil Kumar Yadav, Isha Tyagi, Rahul Kumar, Rajeev Kumar, Srayan Ghosh, Joyati Das, Gopaljee Jha   +7 more
doaj   +1 more source

Comparative analyses of nuclear proteome: extending its function

Frontiers in Plant Science, 2013
Organeller proteomics is an emerging technology that is critical in determining the cellular signal transduction pathways. Nucleus, the regulatory hub of the eukaryotic cell is a dynamic system and a repository of various macromolecules that serve as ...
Kanika eNarula, Niranjan eChakraborty, Asis eDatta, Subhra eChakraborty   +3 more
doaj   +1 more source

Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens [PDF]

, 2009
Background: Pseudomonas fluorescens are common soil bacteria that can improve plant health through nutrient cycling, pathogen antagonism and induction of plant defenses. The genome sequences of strains SBW25 and Pf0-1 were determined and compared to each
Mavromatis, K, Zhang, Xue-Xian, Giddens, Stephen R, Preston, Gail, Yaxley, Alice M., Yaxley, A. M., Hothersall, Joanne, Christopher G Knight, Christina D Moon, Jackson, RW, Gregory L Challis, Ana M Cerdeño-Tárraga, Robert W Jackson, Godfrey, Scott A. C., Murphy, Lee, Seeger, K, Spiers, AJ, Levy, SB, Preston, G. M., Godfrey, Scott A C, Rainey, PB, Cerdeño-Tárraga, Ana M, Gehrig, Stefanie M, Jacob G Malone, Gehrig, S. M., Paul B Rainey, Silby, M. W., Challis, GL, Thomson, N. R., Challis, Gregory L, Hothersall, J, Stephens, E, Andrew J Spiers, Zhang, Xue Xian, Elton Stephens, Gehrig, Stefanie M., Thomas, C. M., Nicholas R Thomson, Lee Murphy, Parkhill, J., Gehrig, SM, Spiers, A. J., Godfrey, Scott AC, Squares, Rob, Robinson, Z., Levy, S. B., Malone, Jacob G., Harris, S., Vernikos, Georgios S., Mavromatis, Konstantinos, Giddens, SR, Yaxley, AM, Quail, Michael A., Stephen R Giddens, Silby, Mark W, Quail, M. A., Stephen D Bentley, Brettin, T. S., Brettin, TS, Cerdeño-Tárraga, AM, Vernikos, GS, Challis, G. L., Seeger, K., Julian Parkhill, Saunders, E., Vernikos, G. S., Knight, C. G., Moon, C. D., Quail, Michael A, Georgios S Vernikos, Spiers, Andrew J., Parkhill, Julian, Moon, CD, Kathy Seeger, Preston, Gail M., Mavromatis, K., Joanne Hothersall, Giddens, Stephen R., Murphy, L, Jackson, Robert W, Godfrey, S. A. C., Mark W Silby, Zhang, XX, Knight, Christopher G, Thomas S Brettin, Levy, Stuart B., Thomas, CM, Thomson, NR, Murphy, L., Zhang, X. X., Harris, D., Jackson, Robert W., Murphy, L., Malone, J. G., Quail, MA, Konstantinos Mavromatis, Stuart B Levy, Knight, Christopher G., Silby, MW, Parkhill, J, Moon, Christina D, Rutter, S, Rutter, Simon, Christopher M Thomas, Xue-Xian Zhang, Stephens, E., Bentley, Stephen D, Harris, D., Thomas, Christopher M., Bentley, Stephen D., Zena Robinson, Alice M Yaxley, Stephens, Elton, Vernikos, Georgios S, Knight, C. G., Harris, Simon, David Harris, Robinson, Z., Knight, Christopher G.; id_orcid, Hothersall, J., Bentley, S. D., Scott AC Godfrey, Giddens, S. R., Thomson, Nicholas R, Thomson, Nicholas R., Stefanie M Gehrig, Moon, Christina D., Robinson, Z, Squares, R, Saunders, Elizabeth, Simon Harris, Elizabeth Saunders, Gail M Preston, Godfrey, SA, Bentley, SD, Jackson, R. W., Rainey, Paul B., Rob Squares, Rainey, Paul B, Rainey, P. B., Knight, CG, Cerdeno-Tarraga, A. M., Cerdeño-Tárraga, Ana M., Seeger, Kathy, Harris, S, Preston, Gail M, Rutter, S., Thomas, Christopher; id_orcid, Thomas, Christopher M, Brettin, Thomas S, Thomson, Nicholas Robert, Michael A Quail, Silby, Mark W., Spiers, Andrew J, Squares, R., Saunders, E, Challis, Gregory L., Simon Rutter, Malone, JG, Preston, GM, Harris, D, Robinson, Zena, Saunders, E., Malone, Jacob G, Yaxley, Alice M, Levy, Stuart B, Harris, David, Brettin, Thomas S.   +167 more
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The genome and lifestage-specific transcriptomes of a plant-parasitic nematode and its host reveal susceptibility genes involved in trans-kingdom synthesis of vitamin B5

, 2021
Plant-parasitic nematodes are a major, and in some cases a dominant, threat to crop production in all agricultural systems. The relative scarcity of classical resistance genes highlights a pressing need to identify new ways to develop nematode-resistant ...
Siddique, Shahid, Masonbrink, Rick E., Baum, Thomas, Maier, Tom R., et al.   +4 more
core  

MicroRNA profiling provides insights into post-transcriptional regulation of gene expression in chickpea root apex under salinity and water deficiency

Scientific Reports, 2017
Activity of root apical meristem (RAM) at the root apex is critical for stress-mediated modulation of root-architecture. Chickpea, like other legumes, possesses a basic open root meristem. Deep sequencing was used to perform microRNA expression profiling
Hitaishi Khandal, Sabiha Parween, Riti Roy, Mukesh Kumar Meena, Debasis Chattopadhyay   +4 more
doaj   +1 more source

An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies [PDF]

, 2014
Background: Cost effective next generation sequencing technologies now enable the production of genomic datasets for many novel planktonic eukaryotes, representing an understudied reservoir of genetic diversity. O.
Moreau, Hervé, Van De Peer, Yves, Adam Eyre-Walker, Château, Annie, Van de Peer, Y., Stephane Rombauts, Carré, Isabelle, Eyre-Walker, Adam, Rivals, E., Peer, Yves van de, Wendy Schackwitz, Schackwitz, Wendy, Benoit Piégu, Moreau, H., Schackwitz, W., Grimsley, Nigel, Evelyne Derelle, Rombauts, Stephane, Eyre Walker, Adam, Blanc-Mathieu, R., Eyre-Walker, A., Verhelst, B., Blanc-Mathieu, Romain, Bouget, François-Yves, Hervé Moreau, Nigel Grimsley, Rivals, Eric, Piégu, Benoit, Isabelle Carré, François-Yves Bouget, Derelle, Evelyne, Eric Rivals, Carré, I., Gwenaël Piganeau, Derelle, E., Bram Verhelst, Verhelst, Bram, Annie Château, Romain Blanc-Mathieu, Bouget, F.-Y., Château, A., Carré, Isabelle A., Piégu, B., Grimsley, N., Piganeau, G., Rombauts, S., Piganeau, Gwenaël, Blanc Mathieu, Romain, Yves Van de Peer   +48 more
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THREE RICE NAC TRANSCRIPTION FACTORS HETEROMERIZE AND ARE ASSOCIATED WITH SEED SIZE

Frontiers in Plant Science, 2016
NACs are plant-specific transcription factors (TFs) involved in multiple aspects of development and stress. In rice, three NAC TF encoding genes, namely ONAC020, ONAC026 and ONAC023 express specifically during seed development, at extremely high levels ...
Iny Elizebeth Mathew, Sweta Das, Arunima Mahto, Pinky Agarwal   +3 more
doaj   +1 more source

The genome and lifestage-specific transcriptomes of a plant-parasitic nematode and its host reveal susceptibility genes involved in trans-kingdom synthesis of vitamin B5

, 2022
Plant-parasitic nematodes are a major threat to crop production in all agricultural systems. The scarcity of classical resistance genes highlights a pressing need to find new ways to develop nematode-resistant germplasm.
Siddique, Shahid, Maier, Tom, Baum, Thomas, Masonbrink, Rick, et al.   +4 more
core