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A pathway analysis method for genome‐wide association studies

Statistics in Medicine, 2012
For genome‐wide association studies, we propose a new method for identifying significant biological pathways. In this approach, we aggregate data across single‐nucleotide polymorphisms to obtain summary measures at the gene level. We then use a hierarchical Bayesian model, which takes the gene‐level summary measures as data, in order to evaluate the ...
Babak, Shahbaba   +2 more
openaire   +2 more sources

A univariate perspective of multivariate genome‐wide association analysis

Genetic Epidemiology, 2018
ABSTRACTMultiple correlated phenotypes are frequently collected in genome‐wide association studies (GWASs), and a systematic, simultaneous analysis of multiple phenotypes can integrate the signals from single phenotypes, therefore increasing the power of detecting genetic signals. However, fundamental questions remain open, including the conditions and
Xiaobo Guo   +5 more
openaire   +2 more sources

Genome-wide association analysis of lead accumulation in maize

Molecular Genetics and Genomics, 2017
Large phenotypic variations in the lead (Pb) concentration were observed in grains and leaves of maize plants. A further understanding of inheritance of Pb accumulation may facilitate improvement of low-Pb-accumulating cultivars in maize. A genome-wide association study was conducted in a population of 269 maize accessions with 43,737 single-nucleotide
Xiongwei Zhao   +13 more
openaire   +2 more sources

Cloud Computing for Genome-Wide Association Analysis

2012
With the increasing availability and affordability of genome-wide genotyping and sequencing technologies, biomedical researchers are faced with increasing computational challenges in managing and analyzing large quantities of genetic data. Previously, this data intensive research required computing and personnel resources accessible only to large ...
James W. Baurley   +2 more
openaire   +1 more source

Genome-wide association studies

Nature Reviews Methods Primers, 2021
Emil Uffelmann   +2 more
exaly  

Genome-Wide Association Analysis Of Sepsis

B110. GENOMICS, METABOLOMICS, AND EPIGENETICS IN LUNG DISEASE: LATE BREAKING ABSTRACTS, 2012
Zhaoxi Wang   +6 more
openaire   +1 more source

The power of genetic diversity in genome-wide association studies of lipids

Nature, 2021
Sarah E Graham   +2 more
exaly  

Genome-wide association analysis in schizophrenia

2016
Stringer, S.   +3 more
openaire   +1 more source

Genome-wide association studies of drug response and toxicity: an opportunity for genome medicine

Nature Reviews Drug Discovery, 2016
Kathleen M Giacomini   +2 more
exaly  

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