Results 251 to 260 of about 141,521 (289)

Phylogeny-driven pangenome analysis uncovers the genomic landscape of domesticated and wild Armeniaca species. [PDF]

Hortic Res
Blanchard I, Bui QT, Mergez A, Denni S, Cornille A, Dufau I, Marande W, Groppi A, Decroocq S, Confais J, Duvaux L, Decroocq V, Linard B.   +12 more
europepmc   +1 more source

KIF18A inhibitor prevents chromosomally unstable osteosarcoma growth by activating spindle assembly checkpoint. [PDF]

Cancer Biol Ther
Yan Q, Zhang Y, Wang P, Fu Y, Ke C, Han S, Xing J, Li H, Zhang K.   +8 more
europepmc   +1 more source

Metagenome-based virome analysis identifies the oral viral signatures for periodontitis. [PDF]

J Oral Microbiol
Chu T, Liu J, Zhang Y, Yang K, Li S, Yan Q, Li Y.   +6 more
europepmc   +1 more source

Complexity welcome: Pangenome graphs for comprehensive population genomics. [PDF]

Quant Plant Biol
Bao Z, Weigel D.
europepmc   +1 more source

Targeted cleavage site mutations in the Gn precursor enable efficient generation of replication-competent rVSV-based surrogates for emerging nairoviruses. [PDF]

Emerg Microbes Infect
Jain S, Marot S, Karaaslan E, Sajadi MM, Baykam N, Yapar D, Shoemaker T, Montgomery JM, Spiropoulou CF, Albariño CG, Bergeron É.   +10 more
europepmc   +1 more source

Insights into goatpox virus and sheeppox virus genomes from pangenome graphs

Downing T.
europepmc   +1 more source

Suppression of LncRNA AC008406.3 sensitizes breast cancer cells to docetaxel via triggering cuproptosis. [PDF]

Cancer Biol Ther
Liu C, Liu S, Lu Z, Cao X, Tong X, Sun I, Hao J, Zhang L.   +7 more
europepmc   +1 more source

Identifying Clusters in Graph Representations of Genomes [PDF]

, 2023
Abstract In many bioinformatics applications the task is to identify biologically significant locations in an individual genome. In our work, we are interested in finding high-density clusters of such biologically meaningful locations in a graph representation of a pangenome, which is a collection of related genomes.
Eva Herencsárová, Broňa Brejová
openaire   +1 more source

Colored de Bruijn Graphs and the Genome Halving Problem [PDF]

IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2007
Breakpoint graph analysis is a key algorithmic technique in studies of genome rearrangements. However, breakpoint graphs are defined only for genomes without duplicated genes, thus limiting their applications in rearrangement analysis.
Pavel Pevzner, Max A Alekseyev
exaly   +3 more sources

A GRAPH DATABASE WITH VISUAL QUERIES FOR GENOMICS [PDF]

Proceedings of the 3rd Asia-Pacific Bioinformatics Conference, 2005
Effective management of data is a major issue in genomics. Genomics data consists of highly interrelated information about genes, proteins, patterns, classifications, and interactions. Graph databases, which model graphs or networks of data, seem a natural way to manage genomics data.
Greg Butler, Guang Wang, Yue Wang, Liqian Zou   +3 more
openaire   +1 more source