Results 1 to 10 of about 5,201,239 (227)

Genome Sequence of Canine Herpesvirus. [PDF]

PLoS ONE, 2016
Canine herpesvirus is a widespread alphaherpesvirus that causes a fatal haemorrhagic disease of neonatal puppies. We have used high-throughput methods to determine the genome sequences of three viral strains (0194, V777 and V1154) isolated in the United ...
Konstantinos V Papageorgiou, Nicolás M Suárez, Gavin S Wilkie, Michael McDonald, Elizabeth M Graham, Andrew J Davison   +5 more
doaj   +4 more sources

GSA: Genome Sequence Archive*

Genomics, Proteomics & Bioinformatics, 2017
With the rapid development of sequencing technologies towards higher throughput and lower cost, sequence data are generated at an unprecedentedly explosive rate.
Yanqing Wang, Fuhai Song, Junwei Zhu, Sisi Zhang, Yadong Yang, Tingting Chen, Bixia Tang, Lili Dong, Nan Ding, Qian Zhang, Zhouxian Bai, Xunong Dong, Huanxin Chen, Mingyuan Sun, Shuang Zhai, Yubin Sun, Lei Yu, Li Lan, Jingfa Xiao, Xiangdong Fang, Hongxing Lei, Zhang Zhang, Wenming Zhao   +22 more
doaj   +2 more sources

Cross-Border Transmissions of the Delta Substrain AY.29 During Tokyo Olympic and Paralympic Games

Frontiers in Microbiology, 2022
Tokyo Olympic and Paralympic Games, postponed for the COVID-19 pandemic, were finally held in the summer of 2021. Just before the games, the Alpha variant was being replaced with the more contagious Delta variant.
Takahiko Koyama, Reitaro Tokumasu, Kotoe Katayama, Ayumu Saito, Michiharu Kudo, Seiya Imoto, Seiya Imoto   +6 more
doaj   +1 more source

The Newfoundland and Labrador mosaic founder population descends from an Irish and British diaspora from 300 years ago

Communications Biology, 2023
The founder population of Newfoundland and Labrador (NL) is a unique genetic resource, in part due to its geographic and cultural isolation, where historical records describe a migration of European settlers, primarily from Ireland and England, to NL in ...
Edmund Gilbert, Heather Zurel, Margaret E. MacMillan, Sedat Demiriz, Sadra Mirhendi, Michael Merrigan, Seamus O’Reilly, Anne M. Molloy, Lawrence C. Brody, Walter Bodmer, Richard A. Leach, Roderick E. M. Scott, Gerald Mugford, Ranjit Randhawa, J. Claiborne Stephens, Alison L. Symington, Gianpiero L. Cavalleri, Michael S. Phillips   +17 more
doaj   +1 more source

Analyzing integrated network of methylation and gene expression profiles in lung squamous cell carcinoma

Scientific Reports, 2022
Gene expression, DNA methylation, and their organizational relationships are commonly altered in lung squamous cell carcinoma (LUSC). To elucidate these complex interactions, we reconstructed a differentially expressed gene network and a differentially ...
Yusri Dwi Heryanto, Kotoe Katayama, Seiya Imoto   +2 more
doaj   +1 more source

The complete sequence of a human genome

bioRxiv, 2021
In 2001, Celera Genomics and the International Human Genome Sequencing Consortium published their initial drafts of the human genome, which revolutionized the field of genomics.
S. Nurk, S. Koren, A. Rhie, M. Rautiainen, A. Bzikadze, Alla Mikheenko, Mitchell R. Vollger, Nicolas Altemose, L. Uralsky, Ariel Gershman, S. Aganezov, Savannah J. Hoyt, M. Diekhans, Glennis A. Logsdon, Michael Alonge, S. Antonarakis, M. Borchers, G. Bouffard, Shelise Y. Brooks, G. V. Caldas, Haoyu Cheng, Chen-Shan Chin, W. Chow, L. G. de Lima, Philip C. Dishuck, R. Durbin, T. Dvorkina, Ian T. Fiddes, G. Formenti, R. Fulton, Arkarachai Fungtammasan, Erik K. Garrison, Patrick G. S. Grady, Tina A. Graves-Lindsay, Ira M. Hall, Nancy F. Hansen, Gabrielle Hartley, Marina Haukness, K. Howe, M. Hunkapiller, Chirag Jain, Miten Jain, E. Jarvis, Peter Kerpedjiev, Melanie Kirsche, M. Kolmogorov, J. Korlach, Milinn Kremitzki, Heng Li, V. Maduro, T. Marschall, Ann M. McCartney, Jennifer McDaniel, Danny E. Miller, J. Mullikin, E. Myers, Nathan D. Olson, B. Paten, P. Peluso, P. Pevzner, David Porubsky, T. Potapova, E. Rogaev, J. Rosenfeld, S. Salzberg, Valerie A. Schneider, F. Sedlazeck, Kishwar Shafin, Colin J. Shew, Alaina Shumate, Y. Sims, A. Smit, Daniela C. Soto, Ivan Sovic, Jessica M. Storer, Aaron M. Streets, B. Sullivan, F. Thibaud-Nissen, J. Torrance, Justin Wagner, B. Walenz, A. Wenger, J. Wood, Chunlin Xiao, Stephanie M. Yan, Alice C. Young, Samantha Zarate, U. Surti, R. McCoy, M. Dennis, I. Alexandrov, J. Gerton, R. O’Neill, W. Timp, J. Zook, M. Schatz, E. Eichler, K. Miga, A. Phillippy   +98 more
semanticscholar   +1 more source

Draft Genome Sequence of Mycobacterium obuense Strain UC1, Isolated from Patient Sputum. [PDF]

, 2015
We report the draft genome sequence of Mycobacterium obuense strain UC1 from a patient sputum sample. This is the first draft genome sequence of Mycobacterium obuense, a rapidly growing scotochromogenic ...
Chiu, Charles Y, Cunningham, Gail, Greninger, Alexander L, Hsu, Elaine D, Miller, Steve, Yu, Joanna M   +5 more
core   +5 more sources

GSAlign: an efficient sequence alignment tool for intra-species genomes

BMC Genomics, 2020
Background Personal genomics and comparative genomics are becoming more important in clinical practice and genome research. Both fields require sequence alignment to discover sequence conservation and variation.
Hsin-Nan Lin, Wen-Lian Hsu
doaj   +1 more source

The complete chloroplast genome and phylogenetic analysis of Manglietia ventii (Magnoliaceae)

Mitochondrial DNA. Part B. Resources, 2022
Manglietia ventii is a highly ornamental timber tree species that is listed as endangered on the IUCN Red List. This study was conducted on the complete chloroplast genome of M. ventii.
Yuchang Wang, Dawei Wang
doaj   +1 more source

Genome sequence-based species delimitation with confidence intervals and improved distance functions

BMC Bioinformatics, 2013
For the last 25 years species delimitation in prokaryotes (Archaea and Bacteria) was to a large extent based on DNA-DNA hybridization (DDH), a tedious lab procedure designed in the early 1970s that served its purpose astonishingly well in the absence of ...
Jan P. Meier-Kolthoff, Alexander F. Auch, H. Klenk, M. Göker   +3 more
semanticscholar   +1 more source