Draft Genome Sequence of the Yeast Rhodotorula sp. Strain CCFEE 5036, Isolated from McMurdo Dry Valleys, Antarctica. [PDF]
, 2020 A draft genome sequence was assembled and annotated of the basidiomycetous yeast Rhodotorula sp. strain CCFEE 5036, isolated from Antarctic soil communities. The genome assembly is 19.07 megabases and encodes 6,434 protein-coding genes. The sequence will
Coleine, Claudia +4 more
core +1 more source
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities.
International Journal of Systematic and Evolutionary Microbiology, 2007 DNA-DNA hybridization (DDH) values have been used by bacterial taxonomists since the 1960s to determine relatedness between strains and are still the most important criterion in the delineation of bacterial species.
J. Goris +5 more
semanticscholar +1 more source
Dissecting spatio‐temporal protein networks driving human heart development and related disorders
Molecular Systems Biology, 2010 Aberrant organ development is associated with a wide spectrum of disorders, from schizophrenia to congenital heart disease, but systems‐level insight into the underlying processes is very limited. Using heart morphogenesis as general model for dissecting
Kasper Lage +20 more
doaj +1 more source
Privacy-Preserving Compressed Reference-Oriented Alignment Map Using Decentralized Storage
IEEE Access, 2018 In bioinformatics, researchers have endeavored to resolve the following two issues: 1) how to increase the efficiency of storage through compression and 2) how to provide confidentiality for the genome sequence data.
Doo-Hee Hwang +4 more
doaj +1 more source
Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence [PDF]
, 2003 BACKGROUND: Previous studies have suggested that recent segmental duplications, which are often involved in chromosome rearrangements underlying genomic disease, account for some 5% of the human genome.
Cheung, Joseph +6 more
core +2 more sources
Genome sequence of Shigella sonnei 4303
Gut Pathogens, 2018 Background Shigella spp. are Gram-negative intracellular pathogenic bacteria belonging to the family Enterobacteriaceae and can cause bacterial dysentery, a severe diarrheal disease.
Laura Deutsch-Nagy +6 more
doaj +1 more source
Complete chloroplast genome sequence of Solanum hjertingii, one of the wild potato relatives
Mitochondrial DNA. Part B. Resources, 2022 Solanum hjertingii is a wild tuber-bearing species classified in the Solanaceae family. The chloroplast genome of S. hjertingii was completed via de novo assembly using Illumina paired-end sequencing data.
Tae-Ho Park
doaj +1 more source
The genome sequence of Drosophila melanogaster.
Science, 2000 The fly Drosophila melanogaster is one of the most intensively studied organisms in biology and serves as a model system for the investigation of many developmental and cellular processes common to higher eukaryotes, including humans.
M. Adams +194 more
semanticscholar +1 more source
An improved Plasmodium cynomolgi genome assembly reveals an unexpected methyltransferase gene expansion. [PDF]
, 2017 Background: Plasmodium cynomolgi, a non-human primate malaria parasite species, has been an important model parasite since its discovery in 1907. Similarities in the biology of P.
Berriman, Matt +7 more
core +2 more sources
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
Nature, 2007 The analysis of the first plant genomes provided unexpected evidence for genome duplication events in species that had previously been considered as true diploids on the basis of their genetics.
O. Jaillon +55 more
semanticscholar +1 more source