Results 31 to 40 of about 1,050,824 (300)

Human genome epidemiology, progress and future [PDF]

open access: yesThe Journal of Biomedical Research, 2013
Human genome epidemiology (HuGE) uses systematic applications of epidemiologic methods to assess the impact of human genetic variation on health and disease. In the past ten years, human genome epidemiology has made great progresses along with advances in genomics technologies, which make it possible for the examination of genetic variants in a large ...
Shen, Hongbing, Jin, Guangfu
openaire   +2 more sources

Standard Sample Storage Conditions Have an Impact on Inferred Microbiome Composition and Antimicrobial Resistance Patterns

open access: yesMicrobiology Spectrum, 2021
Storage of biological specimens is crucial in the life and medical sciences. Storage conditions for samples can be different for a number of reasons, and it is unclear what effect this can have on the inferred microbiome composition in metagenomics ...
Casper Sahl Poulsen   +3 more
doaj   +1 more source

Mutation of hilD in a Salmonella Derby lineage linked to swine adaptation and reduced risk to human health

open access: yesScientific Reports, 2020
Salmonella enterica variants exhibit diverse host adaptation, outcome of infection, and associated risk to food safety. Analysis of the distribution of Salmonella enterica serovar Derby (S.
Martina Tambassi   +10 more
doaj   +1 more source

Molecular Epidemiology of Giardia Infections in the Genomic Era [PDF]

open access: yesTrends in Parasitology, 2021
Giardia duodenalis is a major gastrointestinal parasite of humans and animals across the globe. It is also of interest from an evolutionary perspective as it possesses many features that are unique among the eukaryotes, including its distinctive binucleate cell structure.
Capewell, Paul   +4 more
openaire   +2 more sources

Genomic fingerprinting in the epidemiology of gonorrhoea

open access: yesActa Dermato-Venereologica, 1985
We investigated the usefulness of the restriction enzyme (RE) fingerprinting for epidemiological tracing in gonococcal disease. The RE patterns of three paired gonococcal isolates showed corresponding identical fingerprints. Within each of the three pairs of epidemiologically linked isolates the respective restriction patterns were completely identical.
E S, Falk   +5 more
openaire   +2 more sources

Enhanced discrimination of Clostridioides difficile transmission using whole-genome sequencing and in silico multi-locus variable number tandem repeat analysis

open access: yesMicrobiology Spectrum
Whole-genome sequencing (WGS) is used to establish genetic relatedness of bacteria and track outbreaks in healthcare settings. While WGS provides sufficient discriminatory power to make inferences about genetic relatedness and transmission for most ...
Alexander J. Sundermann   +10 more
doaj   +1 more source

Evaluation of white spot syndrome virus variable DNA loci as molecular markers of virus spread at intermediate spatiotemporal scales [PDF]

open access: yes, 2010
Variable genomic loci have been employed in a number of molecular epidemiology studies of white spot syndrome virus (WSSV), but it is unknown which loci are suitable molecular markers for determining WSSV spread on different spatiotemporal scales ...
Bui Thi Minh Dieu   +3 more
core   +1 more source

Replication Data for: Genomic epidemiology of SARS-CoV-2 in Sudan: A retrospective analysis 2020-2022

open access: yes, 2023
This is a replication dataset for the manuscript titled:" Genomic epidemiology of SARS-CoV-2 in Sudan: A retrospective analysis 2020-2022." The dataset presented is part of a study that investigated the genomic epidemiology of SARS-CoV-2 in Sudan.
Lambisia, Arnold W.   +2 more
core   +1 more source

Genomic epidemiology of salmonid alphavirus in Norwegian aquaculture reveals recent subtype-2 transmission dynamics and novel subtype-3 lineages [PDF]

open access: yes, 2021
Viral disease poses a major barrier to sustainable aquaculture, with outbreaks causing large economic losses and growing concerns for fish welfare. Genomic epidemiology can support disease control by providing rapid inferences on viral evolution and ...
Daniel J. Macqueen   +16 more
core   +1 more source

Molecular epidemiology and genomics of group A Streptococcus [PDF]

open access: yesInfection, Genetics and Evolution, 2015
Streptococcus pyogenes (group A Streptococcus; GAS) is a strict human pathogen with a very high prevalence worldwide. This review highlights the genetic organization of the species and the important ecological considerations that impact its evolution. Recent advances are presented on the topics of molecular epidemiology, population biology, molecular ...
Debra E, Bessen   +5 more
openaire   +2 more sources

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