Results 111 to 120 of about 385,420 (212)

Curated loci prime editing (cliPE) for accessible multiplexed assays of variant effect (MAVEs) [PDF]

arXiv
Multiplexed assays of variant effect (MAVEs) perform simultaneous characterization of many variants. Prime editing has been recently adopted for introducing many variants in their native genomic contexts. However, robust protocols and standards are limited, preventing widespread uptake. Herein, we describe curated loci prime editing (cliPE) which is an
arxiv  

Advanced resources for plant genomics: a BAC library specific for the short arm of wheat chromosome 1B [PDF]

, 2006
Jaroslav Janda, Jan Šafář, Marie Kubaláková, Jan Bartoš, Pavlína Kovářová, Pavla Suchánková, Stéphanie Pateyron, Jarmila Číhalíková, Pierre Sourdille, Hana Šimková, Patricia Faivre‐Rampant, Eva Hřibová, Michel Bernard, Adam J. Lukaszewski, Jaroslav Doležel, Boulos Chalhoub   +15 more
openalex   +1 more source

Lock-free de Bruijn graph [PDF]

arXiv
De Bruijn graph is one of the most important data structures used in de-novo genome assembly algorithms, especially for NGS data. There is a growing need for parallel data structures and algorithms due to the increasing number of cores in modern computers.
arxiv  

Identification and characterization of 17 microsatellite primers for the tick, Ixodes ricinus, using enriched genomic libraries [PDF]

, 2006
Knut H. Røed, Gunnar Hasle, V. MIDTHJELL, Grethe Skretting, Hans Petter Leinaas   +4 more
openalex   +1 more source

Construction of Signature-tagged Mutant Library in Mesorhizobium loti as a Powerful Tool for Functional Genomics [PDF]

, 2008
Yoshikazu Shimoda, Hisayuki Mitsui, H. Kamimatsuse, Kiwamu Minamisawa, Eri Nishiyama, Yoshiyuki Ohtsubo, Yuji Nagata, Masataka Tsuda, Sayaka Shinpo, Atsushi Watanabe, M. Kohara, Manabu Yamada, Yasukazu Nakamura, Sho Tabata, Shusei Sato   +14 more
openalex   +1 more source

Construction Fractional Genomic Libraries and Screening Microsatellites DNA of <I>Esox reieherti</I> Dybowski [PDF]

, 2008
Hongzhe Wang
openalex   +1 more source

btllib: A C++ library with Python interface for efficient genomic sequence processing [PDF]

, 2022
Vladimir Nikolić, Parham Kazemi, Lauren Coombe, Johnathan Wong, Amirhossein Afshinfard, Justin Chu, René L. Warren, İnanç Birol   +7 more
openalex   +1 more source

Protocol for detecting genomic insulators in Drosophila using insulator-seq, a massively parallel reporter assay

STAR Protocols
Summary: Genomic insulators are DNA elements that prevent transcriptional activation of a promoter by an enhancer when interposed. We present a protocol for insulator-seq that enables high-throughput screening of genomic insulators using a plasmid-based ...
Anastasiia Tonelli, Pascal Cousin, Maria Cristina Gambetta   +2 more
doaj  

A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS) [PDF]

, 2008
Hana Šimková, Jan Šafář, Pavla Suchánková, Pavlína Kovářová, Jan Bartoš, Marie Kubaláková, Jaroslav Janda, Jarmila Číhalíková, Rohit Mago, T. Lelley, Jaroslav Doležel   +10 more
openalex   +1 more source

cDNA Library Preparation for scRNA-seq of Human Meniscus (10x Genomics) v1 [PDF]

, 2022
Merissa Olmer
openalex   +1 more source