Results 21 to 30 of about 363,020 (279)

Structural variation in the 3D genome [PDF]

open access: yesNature Reviews Genetics, 2018
Structural and quantitative chromosomal rearrangements, collectively referred to as structural variation (SV), contribute to a large extent to the genetic diversity of the human genome and thus are of high relevance for cancer genetics, rare diseases and evolutionary genetics.
Malte Spielmann   +2 more
openaire   +3 more sources

Genomic technologies to improve variation identification in undiagnosed diseases

open access: yesPediatrics and Neonatology, 2023
Human genome variation has increasingly posed challenges and opportunities for patients, medical providers, and an increasing group of stakeholders including advocacy groups, disadvantaged communities, public health experts, and scientists.
Joseph T.C. Shieh
doaj   +1 more source

Structural and genomic variation in preterm birth [PDF]

open access: yesPediatric Research, 2016
Runs of homozygosity (ROH) are consecutive homozygous genotypes, which may result from population inbreeding or consanguineous marriages. ROH enhance the expression of recessive traits.We mapped ROH in a case control study of women delivering at term compared with women delivering at or before 34 wk gestation. Gene sets known to be important in risk of
Uzun, Alper   +6 more
openaire   +2 more sources

MGA-seq: robust identification of extrachromosomal DNA and genetic variants using multiple genetic abnormality sequencing

open access: yesGenome Biology, 2023
Genomic abnormalities are strongly associated with cancer and infertility. In this study, we develop a simple and efficient method — multiple genetic abnormality sequencing (MGA-Seq) — to simultaneously detect structural variation, copy number variation,
Da Lin   +33 more
doaj   +1 more source

Resequencing of durian genomes reveals large genetic variations among different cultivars

open access: yesFrontiers in Plant Science, 2023
Durian (Durio zibethinus), which yields the fruit known as the “King of Fruits,” is an important economic crop in Southeast Asia. Several durian cultivars have been developed in this region.
Wanapinun Nawae   +7 more
doaj   +1 more source

Structural variations in cancer and the 3D genome

open access: yesNature Reviews Cancer, 2022
Structural variations (SVs) affect more of the cancer genome than any other type of somatic genetic alteration but difficulties in detecting and interpreting them have limited our understanding. Clinical cancer sequencing also increasingly aims to detect SVs, leading to a widespread necessity to interpret their biological and clinical relevance ...
Frank Dubois   +3 more
openaire   +4 more sources

Nuclear Receptor Gene Variants Underlying Disorders/Differences of Sex Development through Abnormal Testicular Development

open access: yesBiomolecules, 2023
Gonadal development is the first step in human reproduction. Aberrant gonadal development during the fetal period is a major cause of disorders/differences of sex development (DSD).
Atsushi Hattori, Maki Fukami
doaj   +1 more source

Structural genomic variation in ischemic stroke [PDF]

open access: yesNeurogenetics, 2008
Technological advances in molecular genetics allow rapid and sensitive identification of genomic copy number variants (CNVs). This, in turn, has sparked interest in the function such variation may play in disease. While a role for copy number mutations as a cause of Mendelian disorders is well established, it is unclear whether CNVs may affect risk for
Mar, Matarin   +17 more
openaire   +2 more sources

Identification of Structural Variation in Chimpanzees Using Optical Mapping and Nanopore Sequencing. [PDF]

open access: yes, 2020
Recent efforts to comprehensively characterize great ape genetic diversity using short-read sequencing and single-nucleotide variants have led to important discoveries related to selection within species, demographic history, and lineage-specific traits.
Andrés, Aida M   +7 more
core   +3 more sources

Indels, structural variation, and recombination drive genomic diversity inPlasmodium falciparum [PDF]

open access: yes, 2016
The malaria parasite Plasmodium falciparum has a great capacity for evolutionary adaptation to evade host immunity and develop drug resistance. Current understanding of parasite evolution is impeded by the fact that a large fraction of the genome is ...
Campino, Susana   +21 more
core   +3 more sources

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