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LinkedImm: a linked data graph database for integrating immunological data [PDF]

open access: yesBMC Bioinformatics, 2021
Background Many systems biology studies leverage the integration of multiple data types (across different data sources) to offer a more comprehensive view of the biological system being studied. While SQL (Structured Query Language) databases are popular
Syed Ahmad Chan Bukhari   +4 more
doaj   +2 more sources

A cancer graph: a lung cancer property graph database in Neo4j [PDF]

open access: yesBMC Research Notes, 2022
Objectives A novel graph data model of non-small cell lung cancer clinical and genomic data has been constructed with two aims: (1) provide a suitable model for facilitating graph analytics within the Neo4j framework or through tools which can interact ...
David Tuck
doaj   +2 more sources

Reactome graph database: Efficient access to complex pathway data. [PDF]

open access: yesPLoS Computational Biology, 2018
Reactome is a free, open-source, open-data, curated and peer-reviewed knowledgebase of biomolecular pathways. One of its main priorities is to provide easy and efficient access to its high quality curated data.
Antonio Fabregat   +9 more
doaj   +2 more sources

Functional querying in graph databases [PDF]

open access: yesVietnam Journal of Computer Science, 2017
The paper is focused on a functional querying in graph databases. We consider labelled property graph model and mention also the graph model behind XML databases. An attention is devoted to functional modelling of graph databases both at a conceptual and
Jaroslav Pokorný
doaj   +2 more sources

RELATIONAL DATABASE AND GRAPH DATABASE: A COMPARATIVE ANALYSIS [PDF]

open access: yesJournal of Process Management and New Technologies, 2017
Since 1970, relational database models have been in use for storing, manipulating and retrieving data. The importance of relational databases is going to decrease due to the exponential growth of data as it is difficult to work with large number of ...
Surajit Medhi, Hemanta K. Baruah
doaj   +3 more sources

Improving the Computational Performance of Ontology-Based Classification Using Graph Databases [PDF]

open access: goldRemote Sensing, 2015
The increasing availability of very high-resolution remote sensing imagery (i.e., from satellites, airborne laser scanning, or aerial photography) represents both a blessing and a curse for researchers.
Thomas J. Lampoltshammer   +1 more
doaj   +2 more sources

Conversion Method from Relational Database to Graph Database [PDF]

open access: yesJisuanji kexue, 2021
Due to the differences between the storage mode of relational database and graph database,during the process of transforming data in relational database to graph database,it is necessary to solve the main problems of edge definition,vertex uniqueness and
E Hai-hong, HAN Peng-hao, SONG Mei-na
doaj   +1 more source

MULTI-RESOLUTION REPRESENTATION USING GRAPH DATABASE [PDF]

open access: yesISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences, 2022
Multi-resolution representation has always been an important and popular data source for many research and applications, such as navigation, land cover, map generation, media event forecasting, etc.
Y. Huang, E. Stefanakis
doaj   +1 more source

GPU-based Graph Analysis and Computation Method for Graph Database [PDF]

open access: yesJisuanji gongcheng, 2021
Most of the existing graph databases use CPU-based distributed graph computing engines(such as GraphX) for online analysis operations, but the limited number of CPU cores will lead to low computing efficiency, and the synchronization between clusters ...
QIAN Shangyun, SHAO Zhiyuan, ZHENG Ran, CHEN Jilin
doaj   +1 more source

Modelling Metadata and Data from Censuses and Surveys with Graph Databases

open access: yesJurnal RESTI (Rekayasa Sistem dan Teknologi Informasi), 2023
Relational database users are switching to non-relational databases because non-relational databases are better able to handle dynamic data storage. One of the institutions that require dynamic data storage is Statistics Indonesia (BPS).
Alya Faradila, Lutfi Rahmatuti Maghfiroh
doaj   +1 more source

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