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LinkedImm: a linked data graph database for integrating immunological data [PDF]

open access: yesBMC Bioinformatics, 2021
Background Many systems biology studies leverage the integration of multiple data types (across different data sources) to offer a more comprehensive view of the biological system being studied. While SQL (Structured Query Language) databases are popular
Syed Ahmad Chan Bukhari   +4 more
doaj   +2 more sources

RELATIONAL DATABASE AND GRAPH DATABASE: A COMPARATIVE ANALYSIS [PDF]

open access: yesJournal of Process Management and New Technologies, 2017
Since 1970, relational database models have been in use for storing, manipulating and retrieving data. The importance of relational databases is going to decrease due to the exponential growth of data as it is difficult to work with large number of ...
Surajit Medhi, Hemanta K. Baruah
doaj   +3 more sources

Functional querying in graph databases [PDF]

open access: yesVietnam Journal of Computer Science, 2017
The paper is focused on a functional querying in graph databases. We consider labelled property graph model and mention also the graph model behind XML databases. An attention is devoted to functional modelling of graph databases both at a conceptual and
Jaroslav Pokorný
doaj   +2 more sources

A cancer graph: a lung cancer property graph database in Neo4j [PDF]

open access: yesBMC Research Notes, 2022
Objectives A novel graph data model of non-small cell lung cancer clinical and genomic data has been constructed with two aims: (1) provide a suitable model for facilitating graph analytics within the Neo4j framework or through tools which can interact ...
David Tuck
doaj   +2 more sources

Reactome graph database: Efficient access to complex pathway data. [PDF]

open access: yesPLoS Computational Biology, 2018
Reactome is a free, open-source, open-data, curated and peer-reviewed knowledgebase of biomolecular pathways. One of its main priorities is to provide easy and efficient access to its high quality curated data.
Antonio Fabregat   +9 more
doaj   +2 more sources

Attack Graph to Graph Database

open access: goldIOSR Journal of Computer Engineering, 2014
Databases are an integral part of almost any computing system today, and users heavily rely on the services they provide. When we interact with a computing system, we expect that any data be stored for future use, that the data is able to be looked up quickly, and that we can perform complex queries against the data stored in the database.
Iosr Journals, Saurav Saraff
openalex   +2 more sources

Graph Neural Networks on Graph Databases [PDF]

open access: green
Training graph neural networks on large datasets has long been a challenge. Traditional approaches include efficiently representing the whole graph in-memory, designing parameter efficient and sampling-based models, and graph partitioning in a distributed setup. Separately, graph databases with native graph storage and query engines have been developed,
Dmytro Lopushanskyy, Borun Shi
openalex   +3 more sources

Real-Time Text-to-Cypher Query Generation with Large Language Models for Graph Databases [PDF]

open access: goldFuture Internet
Based on their ability to efficiently and intuitively represent real-world relationships and structures, graph databases are gaining increasing popularity.
Markus Hornsteiner   +5 more
doaj   +2 more sources

Conversion Method from Relational Database to Graph Database [PDF]

open access: yesJisuanji kexue, 2021
Due to the differences between the storage mode of relational database and graph database,during the process of transforming data in relational database to graph database,it is necessary to solve the main problems of edge definition,vertex uniqueness and
E Hai-hong, HAN Peng-hao, SONG Mei-na
doaj   +1 more source

MULTI-RESOLUTION REPRESENTATION USING GRAPH DATABASE [PDF]

open access: yesISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences, 2022
Multi-resolution representation has always been an important and popular data source for many research and applications, such as navigation, land cover, map generation, media event forecasting, etc.
Y. Huang, E. Stefanakis
doaj   +1 more source

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