Results 121 to 130 of about 1,047,942 (207)

CABRI-Graph: A Tool for Research and Teaching in Graph Theory

, 1996
We present the graph visualization and computional system CABRI-Graph, an interactive tool that can be used by student, teacher or researcher. The user may construct graphs interactively, select algorithms or graph transformations from a menu, and view ...
Carbonneaux, Yves, Laborde, Jean-Marie, Madani, Rafaï Mourad   +2 more
core   +1 more source

ATZ‐1 promotes DNA replication efficiency to maintain normal meiotic function

FEBS Open Bio, EarlyView.
Absence of ATZ‐1 interferes with meiotic DNA replication and cell cycle function via CHK‐1. This causes downstream defects associated with DNA damage and genomic integrity. Taken together, this study suggests that ATZ‐1 influences DNA replication efficiency and cell cycle function to maintain normal meiotic function.
Taylin E. Gourley, Luke W. Molesworth, Nethma H. Waduge, Fahimeh Eskandari, Peter R. Boag, Gregory M. Davis   +5 more
wiley   +1 more source

An object-oriented design for graph visualization [PDF]

, 2000
Many applications, from everyday file system browsers to visual programming tools, require the display of network and graph structures. The Graph Visualization Framework (GVF) is an architecture that supports the tasks common to most graph browsers and ...
Melançon, G. (Guy), Herman, I. (Ivan), Marshall, M.S. (Scott)   +2 more
core   +1 more source

A Survey of Multi-faceted Graph Visualization

, 2015
Graph visualization is an important field in information visualization that is centered on the graphical display of graph-structured data. Yet real world data is rarely just graph-structured, but instead exhibits multiple facets, such as multivariate ...
Schulz, Hans-Jörg, Hadlak, Steffen, Schumann, Heidrun   +2 more
core   +1 more source

Purification and preparation of Marchantia polymorpha Auxin Response Factor 2 for phase separation studies

FEBS Open Bio, EarlyView.
We describe detailed protocols for the purification and preparation of Marchantia polymorpha Auxin Response Factor 2 (MpARF2). This protein is fused to an MBP solubility tag and an mNG fluorescent tag and is purified from Escherichia coli. The presented procedures make it possible to study MpARF2 assemblies, which could arise from phase separation ...
Bas Janssen, Robin Romein, Willy A. M. van den Berg, Simon Lindhoud, Jan Willem Borst, Carlo P. M. van Mierlo   +5 more
wiley   +1 more source

Semi-Supervised Learning for Multi-View Data Classification and Visualization

Information
Data visualization has several advantages, such as representing vast amounts of data and visually demonstrating patterns within it. Manifold learning methods help us estimate lower-dimensional representations of data, thereby enabling more effective ...
Najmeh Ziraki, Alireza Bosaghzadeh, Fadi Dornaika   +2 more
doaj   +1 more source

Heterotropic regulation and negative homotropic cooperativity

FEBS Open Bio, EarlyView.
We identified a structural module common to some proteins that couple negative cooperativity with heterotropic regulation, two features that rarely coexist. These proteins are ring‐like and present an ordered asymmetry whereby noncontacting subunits are symmetric, and their tertiary structure differs from that of contacting subunits.
Veronica Morea, Francesco Angelucci, Federica Arnesano, Gianmarco Pascarella, Patrizio Di Micco, Andrea Bellelli   +5 more
wiley   +1 more source

The Analysis of Complex Networks with Dynamic Graph Visualization

Моделирование и анализ информационных систем, 2010
The work describes a technique for dynamic graph visualization that helps us to analyze complex networks. Our method builds layouts for a sequence of graphs, while preserving the mental map. We show how to modify force-directed algorithms for the dynamic
S. N. Pupyrev, A. V. Tikhonov
doaj  

On Kamada-Kawai graph layout with graph neural networks

Радіоелектронні і комп'ютерні системи
Traditional force-directed layout algorithms, such as the Kamada-Kawai (KK) method, are widely used for graph visualization due to their ability to produce aesthetically pleasing layouts.
Olena Linnyk, Lyudmyla Polyakova, Iryna Zaretska   +2 more
doaj   +1 more source

GelMA‐based 3D spheroids recapitulate transcriptomic and functional hallmarks of myeloid sarcoma

FEBS Open Bio, EarlyView.
GelMA 5% hydrogels support the formation of myeloid leukemia spheroids that recapitulate MS‐specific features, including G1 arrest, apoptosis, and ECM‐driven transcriptomic reprogramming. The 3D model mimicked soft‐tissue‐like stiffness and oxygen conditions, and transcriptomic convergence with primary MS samples confirmed its utility as a preclinical ...
Nicolas Germain, Elise Buret, Le Hoang Thanh Nguyen, Marion Cocheteux, Nicolas Touya, Mélanie Dhayer, Romain Dubois, Frank Lafont, Sebastien Janel, Patrice Maboudou, Steve Lancel, Philippe Marchetti   +11 more
wiley   +1 more source