Results 71 to 80 of about 609 (113)

Phage Diversity in the Human Gut Microbiome: a Taxonomist’s Perspective

open access: yesmSystems, 2021
Bacteriophages (phages) have been known for over a century, but only in the last 2 decades have we really come to appreciate how abundant and diverse they are.
Evelien M. Adriaenssens
doaj   +1 more source

The effects of stress on gut virome: Implications on infectious disease and systemic disorders

open access: yesMicrobiologyOpen, Volume 13, Issue 5, October 2024.
Stress conditions can weaken the host's immune system, affecting the entire gut–brain axis. Concurrently, disruptions in the composition of the gut microbiota are associated with exacerbations of diseases. This review explores the complex interplay between stress, gut virome, and the host immune system.
Francesca Talarico   +5 more
wiley   +1 more source

An Update Review to Cast Light on the Possible Role of Altered Oropharyngeal Microbiota in Differentiating True Psychosis from Malingered Psychosis in a Forensic Psychiatric Setting

open access: yesMental Illness, Volume 2024, Issue 1, 2024.
Over the past few years, malingered psychosis has had a progressive occurrence since a great deal of attention has been directed to the closures of long‐stay psychiatric institutions and care in the community. Therefore, malingered psychosis needs to be identified to conduct precise forensic assessments and prevent miscarriages of justice and misuse of
Mohsen Khosravi   +9 more
wiley   +1 more source

A universe of human gut-derived bacterial prophages: unveiling the hidden viral players in intestinal microecology

open access: yesGut Microbes
Prophages, which are an existing form of temperate phages that integrate into host genomes, have been found extensively present in diverse bacterial species. The human gut microbiome, characterized by its complexity, dynamism, and interconnectivity among
Zhangming Pei   +8 more
doaj   +1 more source

Virome Sequencing of the Human Intestinal Mucosal–Luminal Interface

open access: yesFrontiers in Cellular and Infection Microbiology, 2020
While the human gut virome has been increasingly explored in recent years, nearly all studies have been limited to fecal sampling. The mucosal–luminal interface has been established as a viable sample type for profiling the microbial biogeography of the ...
Austin Yan   +4 more
doaj   +1 more source

Reconsidering ventilator-associated pneumonia from a new dimension of the lung microbiome

open access: yesEBioMedicine, 2020
Complex microbial communities that reside in the lungs, skin and gut are now appreciated for their role in maintaining organ, tissue and immune homoeostasis.
Laia Fernández-Barat   +2 more
doaj   +1 more source

Additional file 7 of Investigation and characterization of human gut phageome in advanced liver cirrhosis of defined etiologies

open access: yes, 2022
Additional file 7: Figure S1. Functional annotation based on KO analysis performed by FuncTree2 in cirrhotic patients with various etiologies. The KEGG biologic categories are as follows: (1) cellular response to stress (crs); (2) Amino acid utilization biosynthesis metabolism (aau): methionine degradation (md), alanine, aspartate and glutamate ...
Naseri, Mohadeseh   +6 more
openaire   +1 more source

Tracing mother-infant transmission of bacteriophages by means of a novel analytical tool for shotgun metagenomic datasets: METAnnotatorX

open access: yesMicrobiome, 2018
Background Despite the relevance of viral populations, our knowledge of (bacterio) phage populations, i.e., the phageome, suffers from the absence of a “gold standard” protocol for viral DNA extraction with associated in silico sequence processing ...
Christian Milani   +15 more
doaj   +1 more source

Phages and Their Role in Gastrointestinal Disease: Focus on Inflammatory Bowel Disease

open access: yesCells, 2020
Inflammatory bowel diseases (IBDs) are a group of chronic autoinflammatory diseases including Crohn’s disease and ulcerative colitis. Although the molecular mechanisms governing the pathogenesis of gastrointestinal inflammation are not completely clear ...
Martin Maronek   +3 more
doaj   +1 more source

Additional file 1: of A human gut phage catalog correlates the gut phageome with type 2 diabetes

open access: yes, 2018
This pdf file contains supplementary Material and Methods for the detailed descriptions of identification of the large phage scaffolds and definition of the pOTUs. (DOCX 101 kb)
Yingfei Ma   +4 more
openaire   +1 more source

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